KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111955831
Entry
111955831         CDS       T05762                                 
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04514  Cell adhesion molecule (CAM) interaction
salp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:salp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    111955831
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111955831
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:salp00535]
    111955831
Proteoglycans [BR:salp00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   111955831
SSDB
Motif
Pfam: Syndecan SDH8 TGF_beta_GS
Other DBs
NCBI-GeneID: 111955831
NCBI-ProteinID: XP_023831930
LinkDB
Position
LG31:complement(20462343..20498748)
AA seq 413 aa
MKLPPCLMTILAALLAHSALGQTWVPSIDLEGSSGDEYYDDEDLFSGSGSGFPEVKVNPT
AVGVSFTTEEPLPLSTTQATGPAPSAPPAAEPNPNPDALPTPLPTEGEGESGIEWERGRE
RERERERERREKERERERERERQREIERERERERERARAAQTTISPRGPAAVPMATTSTA
TPLAESAAPSSGVQDLVTTEEEDEDVYLSPDPTTSMPMETTTEEEEEEVTTTETETTPLP
ETTAPPTTIGPALTERSSSTPFRPSVLVTTPTKATPTERSTRPQQPSTTMNNELGVNGPS
GDFEIREEDRRQGNEVVGRGRGMETGAEPDLIGNTINTGSSAAQLPQKNILERKEVLIAV
IVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKADKQEEFYA
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgaagctgccgccgtgtctgatgacgatcctcgcggcgctgctcgctcactccgcgctg
ggtcagacctgggttccgtctatagatctagaaggttcttctggagatgagtattatgat
gatgaagacctcttctcaggctctggatctggctttccagaggtgaaggtcaaccctaca
gcggtgggtgtgtctttcaccactgaggagcccctccccctttccaccacccaggccact
ggccccgccccctcagccccacctgcagccgagcccaatcccaaccctgacgctctcccc
accccactacccactgagggagagggggagagtgggatagagtgggagagagggagggag
agagagagggagagggaaagagagagaagagaaaaggagagggagagagaacgagagaga
gagaggcaacgggaaatagagagggaacgagaaagagaacgtgaaagagcgagagccgcc
cagaccaccatctcaccccgtggcccggcggctgttcccatggcgaccaccagcacagcg
acgcctctggcggagagcgcagcaccctctagtggcgtgcaggacctggtcaccacagaa
gaagaggacgaggatgtctacctgtccccagaccccaccaccagtatgcctatggagacc
accacagaagaagaagaagaagaagtgaccactacagagacagagaccacacccctccca
gagacaacagctccacccactacgattggcccagccctaactgagaggtctagctccacc
ccctttaggcccagtgttctggtgaccacgcctactaaagccacacccacagagaggagc
acacgcccacagcagccctctacgacaatgaacaatgaattaggggttaatggacccagc
ggagactttgagatccgggaggaggaccgtcgccagggcaatgaggttgttgggcgtggc
cgtggcatggagactggggcagaacctgatctgattggcaacacaattaacacaggaagt
tctgccgctcaacttcctcagaagaacatcttggagaggaaggaggttctgatagcggtg
atagtggggggcgtggtgggggcactgttcgcagcgttcctggtcatgctgctggtgtac
aggatgaagaagaaagatgaaggcagctacacgctggaggaacccaagcaggccaccgtc
acctaccagaaagctgacaaacaggaggagttctacgcataa

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