Salvelinus sp. IW2-2015 (Arctic char): 111955897
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Entry
111955897 CDS
T05762
Symbol
kdm1b
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111955897 (kdm1b)
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
111955897 (kdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
zf-CW
NAD_binding_8
SWIRM
DAO
Thi4
Pyr_redox_2
HI0933_like
Pyr_redox_3
FAD_binding_3
FAD_oxidored
Lycopene_cycl
FAD_binding_2
Pyr_redox
NAD_binding_9
GIDA
2-Hacid_dh_C
AlaDh_PNT_C
KARI_N
FMO-like
TrkA_N
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
111955897
NCBI-ProteinID:
XP_023832030
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Position
LG31:complement(30850414..30864387)
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AA seq
837 aa
AA seq
DB search
MLTDADYTVNASGARRAKKRIAMESSSGDGQSSLRSSGRQVNVRMKRCNNPPPGQTKRKA
TDTEEEEDQSEKKYRKCEKAGCSATYPVCFASASERCAKNGYTSRWYHLSCGEHFCNECF
DHYYRSHKDGYETYASWKRVWTGNGKSEPSLKAFMADQQLPYWVQCTKPDCGKWRQLTKE
IQLTASLAATYRCGMKFNNVKTEGPDQCSLPEDLRVAEVIDSWWHSMLILPPLFKDSPAN
PFLTAYYPDCVGMSPSGSTSNHSHAELRAEHCRAVPPQIPGLCPYFQPFYQPNECGKALC
VRPDMMELDELYEFPEFSRDPTMYLALRNLILASWHRGCKEVLTPQNCAPHIIVRGLVRV
RCVQEMDRVLLFMTRKGLINTGVLSVKQPLLPERYHNKNVIVIGAGASGLAAARQLQNFG
MQVVMLEASERIGGRVWDDTSLGGVTVGRGAQIVNGCVNNPIALMSEQLSINMHKLGERC
DLFQEGGSATDPAIDKRMDFHFNAILDVVSEWRKDKSQNQDTPLGEKIQEVYKTFLQESG
VQFSQLEEKVLQFHLSNLEYACGSTLDQVSARSWDHNEFFAQFSGDHTLLTEGYSSVLNK
LAEGLDIRIKSPVQAIDYSGDIVKVTSSNGTQWTAQKVLVTVPLTLLQKNIIKFNPPLPE
RKLKAIHSLGAGLIEKVALQFPFRFWDGKIQGADYFGHIPPSPDKRGMFGVFYDMDPQGK
GSVLMSVITGEALPSIRDMEDKDVXDQCMKVLRELFKEQEVPEPVNYFVTRWSRDMWSQM
SYSFVKTGGSGEAYDIIAEDVQGKVFFAGEATNRHFPQTVTGAYLSGVREASKIAAL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgctgacagatgcagattatacagtgaatgcttcaggtgctcggcgtgccaagaagagg
atagcaatggagtcatcatctggggatggtcagtcgtcccttcgctcctccggtagacag
gtcaacgtcagaatgaagcgctgtaataatcctccacctggacagactaaaagaaaagcc
actgacacagaggaagaagaggaccaatcrgagaagaagtacagaaagtgtgaaaaggct
ggatgctcggccacatacccagtgtgctttgctagtgcctctgaaaggtgcgccaaaaac
ggctacacttctcggtggtaccatttgtcctgcggggagcacttttgcaatgagtgtttt
gatcactactatagaagtcacaaagatggctatgagacatatgcatcctggaagagggtt
tggactggcaatgggaaaagtgagccaagtctgaaagctttcatggcagatcaacagctt
ccatactgggtccaatgcactaagccagactgtggaaaatggcgtcagctaaccaaggag
atccagctcactgcctcactagcagccacgtatcgctgtggcatgaagttcaacaatgtc
aagaccgaagggccagaccagtgctctctgccagaagatttgagagtggcggaggtgatc
gacagctggtggcattccatgctgatcctgcccccgttatttaaggacagcccggccaac
cctttcctcacagcctactatcccgactgtgtgggcatgagcccctcaggatccaccagc
aaccactctcatgctgagttgagggcagagcactgcagagctgtcccaccacagattcca
gggctgtgtccatacttccagcccttttaccagcccaacgagtgtggaaaggccttgtgt
gtgcgaccggacatgatggagctggatgaactctatgagtttccagagttttcccgtgac
cccaccatgtacctggccctgcgcaacctcatcctagcctcctggcacagaggctgtaag
gaggtgctgacaccccagaactgtgctccccacatcattgtgcgagggctggtgcgtgtg
cgttgtgtacaggaaatggacagggtgcttctcttcatgaccaggaagggtctgatcaac
actggggttctatcagtcaaacagcccctgcttcctgagcgctaccacaacaagaacgtg
attgtgattggagccggggcatcggggctggctgctgcgcggcaactgcaaaactttggc
atgcaggtggtgatgctcgaggcgagcgagcggattggagggcgggtgtgggacgataca
tcgctgggrggcgtcactgtgggtcggggggctcagattgtgaacggctgtgtgaacaac
ccgattgcactgatgagtgagcagctcagcattaatatgcacaagctgggggagaggtgt
gacctgttccaggagggagggagtgccacagacccggccatcgataagcgcatggacttc
cactttaacgccatcctggatgtggtgtcagaatggaggaaagacaagtctcagaaccag
gacactcctctgggagagaaaatccaggaggtctacaaaacattccttcaggagtctggg
gtccagttcagccagttggaggagaaagtgcttcagttccatctcagcaacctggaatat
gcctgtggaagcacactggaccaggtgtcggctcgatcctgggaccacaatgagttcttt
gctcagttctcaggagaccatacactgctgacagagggctattcgtctgtgcttaacaaa
ctggctgagggcctcgacatccgcatcaagagcccggttcaagctatcgattactcaggg
gatatagtcaaagttacctcatccaacgggactcagtggacagcacagaaagttctggtg
acagtcccattgactttactccagaagaatatcattaaattcaaccctcctcttcctgag
agaaagctgaaagccatccacagtcttggagcaggtctcattgaaaaggttgctctgcag
ttcccgtttcgcttctgggacggaaagatccaaggagcagattactttggtcacattcca
cccagtcctgacaagagagggatgtttggtgtgttctatgacatggatccacagggaaag
gggagtgtcctgatgtccgtcatcactggtgaagcmctgccctctatcagggacatggag
gacaaagatgtcgrtgatcagtgcatgaaggtgctgcgtgaactcttcaaggagcaggag
gtcccagagccggtgaattactttgtgactcggtggagcagagacatgtggtctcagatg
tcatacagcttcgtgaagacaggaggcagtggggaggcctatgacatcattgctgaagat
gtgcaaggaaaagtgttctttgctggggaggcgaccaacaggcactttcctcagacggta
acaggagcctatttgagtggcgtccgagaagcgagtaaaatagctgctttgtga
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