Salvelinus sp. IW2-2015 (Arctic char): 111955938
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Entry
111955938 CDS
T05762
Name
(RefSeq) replication protein A 14 kDa subunit
KO
K10740
replication factor A3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03030
DNA replication
salp03420
Nucleotide excision repair
salp03430
Mismatch repair
salp03440
Homologous recombination
salp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111955938
03420 Nucleotide excision repair
111955938
03430 Mismatch repair
111955938
03440 Homologous recombination
111955938
03460 Fanconi anemia pathway
111955938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salp03032
]
111955938
03400 DNA repair and recombination proteins [BR:
salp03400
]
111955938
DNA replication proteins [BR:
salp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111955938
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111955938
MMR (mismatch excision repair)
111955938
DSBR (double strand breaks repair)
HR (homologous recombination)
111955938
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
Motif
Other DBs
NCBI-GeneID:
111955938
NCBI-ProteinID:
XP_023832094
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Position
LG31:complement(18025597..18027297)
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AA seq
121 aa
AA seq
DB search
MAVFESPKPRINNSMLSQYISRPICFVGRVEKVHPTGKSFTLSDGEGKSASVELNEPLDE
ELSGVVEVVGVVSNKGAIMASAYNMLREDQGIPFDLELYNEALKVIHEYPQHYPFELATS
G
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttttgagtcaccaaaacccagaataaacaattctatgctgtctcaatatatc
agcaggccgatttgcttcgttggacgtgttgagaaggtccatccaacaggaaaatcattc
actctttcagatggagaagggaagtctgcatcagtggaacttaatgagccccttgatgag
gagctgagtggggtggtggaggtggttggtgtagtgtccaacaaaggggcaataatggcc
tctgcatacaacatgctcagagaagaccaaggcattccttttgacctggagctgtacaat
gaagccctgaaagtcatccatgaatacccccagcactatccgtttgaattagccaccagt
ggatga
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