Salvelinus sp. IW2-2015 (Arctic char): 111955944
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Entry
111955944 CDS
T05762
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111955944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111955944
Membrane trafficking [BR:
salp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111955944
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
111955944
NCBI-ProteinID:
XP_023832099
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All DBs
Position
LG31:11612218..11636511
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AA seq
569 aa
AA seq
DB search
MNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKENVENLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLSGVARGRSWEPTLLPRTTQGLTSVLLALKKCPMIRYQLS
SDMAKRLGESVKQIITKEYELFDFRKTEVPPLLLIMDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKELKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
EQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERHLMEVSEVEQELACQ
NDHSSASQNVRRLLQNPRVSELDAVRLVMLYALRYERHSSSILPGLMEELNRKGVSERHR
RMVXSMVEYGGKRVRGSDLINPQDAVAITKQFFKGLKGVENVYTQHAPLLQETLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFVIGGATYEEALAVYNLNRTMPGVRIVLGGTTIHNT
KSFLEEVTLTAGAGQAERVQRAGGHPNRR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacacttgctgtcaagcagtatatctccaaaatgatagaaaacagcgggcca
ggaatgaaggttctgctcatggataaagagacgaccagcatcgtcagtgtggtctacact
caatccgagatcctacagaaggaggtctacttgtttgaaagaatcgactcacagaatcga
gacaacatgaagcacctcaaagccatctgcttcctcaggccaaccaaggagaatgtggaa
aatctgatacaggagctccggcgaccaaagtacagtgtctacttcatctacttcagcaac
gtcatcagtaagagtgagataaaagccctggccgaggcggatgaacaggaggtggttgca
gaagtgcaggagttctatggagacttcattgctgtgaacccacaccttttctccctcaac
ctcagtggtgtggcaaggggtcgtagctgggagcccacgctcctaccacgtaccacccag
ggtctgacctcggtgctgttggccctcaagaaatgtcccatgatccgctaccagctgtcc
tcagacatggccaagagactgggagaaagcgtgaagcaaatcatcaccaaggagtatgag
ctgtttgacttcaggaagacagaggtgcctcctctcctgctcatcatggaccgcagcgat
gacgccatcaccccactactcaaccagtggacgtaccaggccatggtgcacgagctgctt
ggcctcaacaacaaccgtattgacctgtcccgagtcccagggatcagcaaggagctgaag
gaggtggtgctgtctgcagagaacgatgagttctatgccaacaatctgtacctgaacttt
ggagagatcggcacaaacatcaagaacctgatggaggactttcagaagaagaagcccaag
gagcaacagaagctggagtccatctctgatatgaaggcgtttgtggacaactacccccag
ttcaaaaagatgtctggcacagtgtcgaagcacgtgactgtggtgggcgagctgtctcgc
ctggtgagcgagaggcacctgatggaggtgtcagaggtggagcaggagcttgcctgccag
aatgaccactcaagcgcgtcacagaatgtgcgtcggctgctgcagaacccacgggtgagc
gagctggacgcggtgcgcctggtgatgctgtacgcactgcgctacgagagacacagcagc
agcatcctgccgggcctcatggaggagctcaacaggaagggcgtgtcagagaggcatcgc
aggatggtaargtccatggtggagtatggagggaagagggtgagaggaagtgacctcatc
aacccccaagacgcagtcgccatcaccaaacagttcttcaaggggctgaagggagttgag
aatgtgtacacgcagcatgcaccgttactgcaggagacattggaccagctgatcaagggg
cggctgaaggacagtcagttcccctacctaggacccagctcccttcgagacaggccacag
gatatcatagtgttcgtcatcggaggggccacctatgaggaggcgctagcagtctacaac
ctgaaccgcaccatgccaggtgttcggatcgtactgggcggcaccaccatccacaacacc
aagagcttcctggaggaagtgacattgacggcgggtgcgggccaggccgagagggtgcag
agggcgggtggtcatcccaacagacgctga
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