Salvelinus sp. IW2-2015 (Arctic char): 111955952
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Entry
111955952 CDS
T05762
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111955952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111955952
03021 Transcription machinery [BR:
salp03021
]
111955952
03036 Chromosome and associated proteins [BR:
salp03036
]
111955952
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
ARID
111955952
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111955952
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111955952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
111955952
NCBI-ProteinID:
XP_023832109
LinkDB
All DBs
Position
LG31:15695945..15707468
Genome browser
AA seq
2314 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPLEESVPGEKQHVNKEPGSDNGSPGQKDLQDGADA
GNVGGGGEPDMKNGNGNSSRVNNNNNQNDTGGPEGNNHPGMGHHHQGSFPPPPYGYNQHY
SRGPFHQHGGQQSPGMAAAAGPAVQSGNMMDPYPPNSHEHGFPNHFNNYSPFPNRTSYQG
QGYAMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNIGNLQPTSTPTLNQLLTS
PSSTRTYQNYPQGDYSNQEGASKGAADMASSQYGGGHPGWQQRTHHPPPMSPGNTGPGNT
GPLNRNQPPSPMDQAGKMRGQGYGGVNPYSQQQGQGQGPPPPGAQQGASYPGQGYGPPGA
QRYPMGMQGRTPGGMGGMQYGQQMAGYGQQGPGGYGQQSQGYYGQHGPPPHAGQQQSPYP
QQVHPSQGQPSAQHSQPGAPGPYPQGQGPPQVGPPQIQPPYNQGPQQPGPQQGQAVPQGQ
GPQPSYPQQQGPQGQGQQPPQQQLPSQQQGPPQQQERAAPPQAQPPPGHQQPPGHQPSPG
HQPPPSHGGQQPPTGHQPSPGPQGHHPSPGHGGPPQQQGQSQQGQPSPYSQTPPLQQSPF
QRFPPPPQELSQDSFSSQSSAPPSNQPMTSTKSGAEDSMQGRPSSLPDLSGSIDDLPTGT
EGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVTPSRSGP
LSPAAVPGIQMPARPPSAHSDSIHSSMNQSAMGQDRVYMRNPQMPPYGSPQQPGSALSPR
QSSGGQMHPGMGPYPQNNSMGNYGPQGGQYGPQGYPRQPGYSGMPNANYPGGPGGMNPMP
GQAGGAPYAGMPPGRMGPGQMGARPYGPGMGPNMGPGMPPQVTSGMCPPPGMNRKVPGGP
PDAASAMHHGGPGANSIHNRPPGYPPNMPQGMMGSGSPYGPGPGAINSMQGMLNQGGPYG
GGPMGGNMANNTPGMAPSPEFGIDVKLSPAQKMNNKVDGTPKPETKKVKKKSNSSTTTNE
KITRLYELGPEPERRTWVDRYLAFTEEKATGMTNLPAVGRKPLDLFRLYVSVKEIGGLTQ
VNKNKKWRELSTNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDLFTDAKKTTQ
PKIQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPMPVRLQDPFADG
GDPAFARRNSMTPNSYQPGMGGPEMMGHMGPYESNKDPFGGMRKAGEQFMTPGPGPNSGM
EGQFNRGPPGPMGPNMQMGPRQQYPYGPGYDRRQEPGMGPDGSMGPGAPQPNLMPSGADS
GMYSPSRPPPQQRHDSYGNQYPGQGAPPGGPYPNQQPGMFPQQQPNYKRPPVDGGYGPPA
KRHEGDGMYNVPFSGQQQPGPQPSGGPQGQQDMYNQYNAGYPGSDRRPPGPQGQFPFPFG
RDRGPSSGGPNSQSPMPPQMMGSPMQAASDGPQGPMWQGRNEMGYPNYPNRQGPPGPGQG
PPQGYHGMNRSEEMMPGADQRMNHEGQWPGHPSQRQSPYGPGGSGPPMSRPLQSNYQSSQ
NHISQVSSPAPMPRPMESRTSPSKSPYMHSGIKMQKAGPPVPASHIGQAPVQPPLIRRDI
AFPPGSVEASQPILKPRVRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDN
SISTFNLCQLPGFLELVVEYFRRCLIEIFCILKEYEVGDPGQRTLIDPHAADEECSDEEL
PEQEDMEEEEDEEEEDERKSNADTTSSQQVQVKKEEEEEKSTTEKSTAEEEKEREGGESA
STSSAPQNLSLLQEKPKQASKFDKLPIKMVRKKDPFPGGRSSKLGRRQSFDSGLIHWSIG
GGDTTEHIQTHFESRSDLHKQRKRVLPSATESRKVXMPATVSEEPEKTTKPGKEEQTTSP
AEKTSTPTTPAPVTATIDDVLSARPGSVTEEAVRGAAEEQKENRGKFLFSIRQAQQSRRN
VTILEDEPHSKDETPLSTLSDWQDALARRCVCVSNIVRSLSFIPGNDLEMSKHPGLLLLL
GRLVLLHHRHPERKQAPVTYEKEEDEDERVSCERDEWWWDCLEVLRENCLVTLANISGQL
DLSIYPESICLPLLDGLLHWAVCPSAEALDPFPMLGPHGALSPQRLVLETLSKLSIQDNN
VDLILATPPFSRLEKLYGTLVRLVGERKVAVCREMSVVLLANLAQGDSMAARAIAVQKAS
VGNLLGFLEDSLAATQYQQSQSSMMHLQGAHFEPTSVDMMRRAARALHAMAKVEENHSEF
TLYESRLLDISVSPLMNSLVSHVICDVLFLIGQS
NT seq
6945 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgctagcgtcgccactctcaacactagcccgccatccgaacttaaa
aagccggatcgggacccactggaggagtcggtaccgggagagaaacaacatgtaaataaa
gaaccgggatctgacaacggatctccgggacagaaggatctgcaggacggggccgatgct
ggaaatgtagggggaggaggggagcctgacatgaagaacgggaacgggaattcgtccagg
gtgaataataataacaaccagaatgatactgggggaccggaggggaataaccaccccggg
atgggccatcaccaccagggctcattccctccacctccttacggttacaaccagcactac
agccggggcccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcg
gggccggcagtgcagtcaggtaacatgatggacccatacccgcccaactcacacgagcac
ggcttccccaaccattttaacaactacagccccttcccgaaccggacttcttatcagggc
caaggatacgccatgaattccccgcgtaataaccagcccccggcggctggggggcagcca
ggcaagcaacagccagcaggcggaactacagccatggctgcctcgtacaataatcagagg
tataacataggaaacctacaacccacgtctaccccgacattaaatcagctcctaacgtct
cccagctcaacgaggacctaccagaattacccacaaggagactatagtaaccaggaaggg
gctagcaagggagcagcagatatggccagcagtcagtatggtgggggccatccgggttgg
caacaaaggacccaccatccgcctccaatgagcccagggaacacgggacctgggaacacg
ggacctctgaacagaaaccagccccccagccctatggaccaggcagggaagatgcgaggc
cagggatacggtggagtcaacccctactctcagcagcaaggccaggggcagggccctcct
cctccaggggctcaacagggtgcctcctacccaggccagggctacggacccccaggggct
cagagatacccaatgggcatgcagggacgcacccccggcggcatgggtggcatgcaatac
ggacaacagatggccggctatgggcagcagggtccagggggctacggtcagcagagccag
ggctactacggccagcatggccccccaccacacgctggtcagcagcagtccccctacccc
cagcaggtccacccctcacagggtcagccctcagcccaacacagccagcctggggccccc
ggcccctatccccagggccaagggcctccgcaggtgggtccacctcagatccagccgccc
tacaaccagggaccgcagcagccgggtccccagcagggccaggccgtgcctcagggtcag
ggcccccagcccagctaccctcagcagcaaggaccccaagggcaagggcagcagcctcca
cagcagcagctcccctcgcagcagcaaggacccccccagcagcaagaaagggcggcccct
ccacaggcccagccacccccgggccatcaacaacccccaggccaccaaccctctccaggc
caccagccaccccctagccatggtgggcagcagccacccacaggccatcagccctcccca
ggcccccagggccaccacccttctccaggtcacggtggacccccccagcagcagggtcag
tctcagcagggccagccctcaccctactcccagaccccacccctgcagcagtcgcccttc
cagcggtttccacctccgccgcaggagctctcccaggactcgttcagctcccagtccagt
gctcccccctccaaccagcccatgacttccacaaagagtggagcagaggacagcatgcag
ggacggccttctagcttaccggacctctctggttctatagatgacctgccgacgggtacg
gagggagctctgagtccgggcgtcagcacgtcgggggtgtccagtagccagggggaacag
agtaaccccgcccagtcacccttctcaccccacacctcgccccacttgcctggcatccgc
gggccctccccctcccccgtgggctcccctgccagcgtgaccccctcccgctctggaccc
ctttcacctgctgccgtgccaggtatccagatgcctgcccggccacccagcgcccattca
gacagcatccactcatccatgaaccagtcagccatgggccaggacagggtgtacatgcgt
aacccccagatgcctccgtacgggtcgccacagcaacctggctccgccttatccccccgc
cagtcgtcgggaggccagatgcatcctgggatggggccctaccctcagaacaactccatg
gggaactacggccctcagggcggacagtacggaccacaaggctaccccagacagcctggc
tacagtggcatgcccaacgccaactaccctggaggtccaggaggcatgaaccctatgcca
ggccaggctggtggggcgccgtacgcaggcatgccccccggcaggatgggtccaggtcag
atgggtgctcgcccctacggccctgggatgggccccaatatgggccctggcatgccccca
caggtgacctctgggatgtgtccccctccaggcatgaacaggaaggtccccgggggccct
ccagatgcagcctccgccatgcaccacggtggccccggagccaactctatacataacagg
cctccaggctacccccccaacatgccccaggggatgatgggatcagggtctccgtacggc
ccggggccgggggccatcaacagcatgcagggcatgttgaaccagggaggaccctatgga
ggagggcccatgggagggaacatggccaacaacacacctggcatggctcctagccctgag
tttggcatcgatgtcaaactgagcccagcccagaagatgaacaacaaggtggacggcacg
cccaaacctgaaaccaagaaggtaaagaagaagtcaaactcttcgacgacgaccaatgag
aagataactcgtctgtatgagctgggtccagagccggagaggaggacgtgggtagaccgg
tacctggcgttcactgaggagaaggccacgggcatgaccaaccttcccgccgtgggacgc
aaacctctggacctcttcagactttacgtctcggtcaaagagataggaggcctcacacag
gtgaacaagaataagaagtggagggagttgtccaccaacctgaacgtgggcacgtccagc
agcgccgccagctccctgaagaagcagtacatccagtgtctgtacgccttcgagtgcaag
atcgaacgtggcgaggacccgcccccggatctcttcactgacgccaaaaagaccacccag
cccaagatccagccccccagcccagctgggtctggatctctgcagggcccccagacgccc
cagtccaccagtagttccatggcggaggggggagacttgaagccccccaccccagcctcc
acccctcacagccagatgccccccatgcccgtcaggctgcaggatccgtttgcagacggg
ggtgacccagcgtttgccagacggaactccatgacccccaacagctaccagcctgggatg
ggtggtccggagatgatgggtcatatggggccctacgaatccaacaaggacccctttggt
ggcatgaggaaagctggagagcaattcatgactccagggccgggtcctaacagtggtatg
gaggggcagttcaacagaggccccccagggcccatgggccccaacatgcagatgggtccg
agacaacagtacccctacggacctggatatgacaggagacaggagccagggatgggtcct
gacggcagtatgggtcctggggccccccagcccaacctgatgccttcaggggccgactcg
gggatgtactcccctagccgacccccaccgcagcaacgtcatgattcctatggtaatcaa
tatcctggtcaaggagcgccacctggtggcccctaccccaatcagcagccaggaatgttt
ccacagcaacaacccaactacaagcgtcctccagtggacgggggctacggtcccccagcg
aagcgtcaygagggggatgggatgtacaatgtccccttcagcggtcagcagcagccaggr
ccccagccctccgggggcccccagggccaacaagacatgtacaatcagtacaacgcaggc
taccccggctctgaccgccgaccacctggcccccagggccagttccctttccccttcggc
cgagaccgggggccctccagcgggggccccaactcccagtcccccatgcctccccaaatg
atgggcagccctatgcaggcagcctctgacggcccccagggccccatgtggcagggacgc
aacgagatgggttaccccaactaccccaaccgccaggggcctccaggacctggccagggc
cccccccagggctaccacggcatgaaccgctctgaggagatgatgccaggggctgaccag
cggatgaaccatgagggccagtggcctggacaccccagccagagacagtccccctacggg
ccggggggctcgggcccccccatgtccagacccctgcaatccaactatcagagctcccag
aaccatatttcccaggtgtccagccccgcccccatgccccgccccatggagagccggacg
tccccctccaagtcgccctacatgcactcaggcatcaagatgcagaaggcggggcccccc
gtgcccgcgtcccacataggccaggcccccgtgcagccccccctcatcaggcgggacata
gccttccccccagggtcggtggaggcctcccaaccyatcctcaaaccccgagtacgactc
accatgaaagacatcggcaccccagaggcctggagagtgatgatgtcactgaagtcaggc
ttactagcagagagcacgtgggccttggacaccattaatatcctactctacgatgacaac
agcatttctactttcaacctctgccagctgcctgggttcctggagctggtagtggagtat
ttcagacgctgcctcatcgagatcttctgcattctaaaggagtatgaggtgggagaccct
ggccagcggacgctcatcgacccgcatgctgccgacgaagaatgctctgacgaagagctt
cccgagcaggaggacatggaggaggaagaggacgaagaggaggaggacgagaggaagagc
aacgcagacaccacctcgtcgcagcaggtccaggtgaaaaaggaggaggaagaggagaaa
tccacgactgagaagtcgacagcggaggaggagaaggagagggaaggaggggagtctgct
tccacctcctcggccccccagaacctcagcctcctacaggagaaacccaaacaggccagt
aagttcgacaagctgcccatcaagatggtgcgtaagaaagatcccttccctgggggccgt
tccagtaagctaggccggcggcagagctttgacagcggactaatccactggagcatcggc
gggggggacaccacggaacacatccagactcacttcgagagccggtccgacctccataag
cagcggaagcgggtgctgccatcagccaccgagagtagaaaggtcrccatgcccgcgacg
gtgtcagaggaaccagagaagactactaagcctggcaaggaagagcagaccacctcccct
gcagagaagacctccaccccaaccacgcccgccccggtcaccgccaccatcgacgacgtc
ctgtcggcccggccgggctctgtgacggaggaggcggtgcgaggagcagccgaggagcag
aaggagaacagggggaagttcctgttctccatccgtcaggcgcagcagagccgacgcaac
gtcaccatcctggaggacgagcctcacagcaaggacgagaccccgctgagcacgctgtcg
gactggcaggatgccctggcccgccgctgtgtctgcgtctccaacatcgtccgctcgctg
tctttcatccccggcaacgacctggagatgtccaaacacccagggctgctgctgctgctg
ggccgtctggtcctgctccaccaccgtcacccagagaggaaacaggcccccgtcacctac
gagaaggaggaggacgaggacgagagggtgagctgtgagagggacgagtggtggtgggac
tgtctggaggtcctcagggagaactgcctggtcactctggctaacatctccggccagttg
gacttgtccatctacccagagagcatctgtctgcccctgctggacggcctgcttcattgg
gctgtttgtccttcggccgaggccctggaccctttccccatgctggggccccatggggcc
ctatccccccagagactggtgctggagaccctcagcaagctgagcatccaggacaacaac
gtggaccttatcctggccacgccgccgttcagccggctggagaagctgtacgggacgctg
gtgcgcctggttggggagaggaaggtggctgtctgcagggagatgtctgtggtcttactg
gccaacctggcccagggagacagcatggcggccagggccatcgccgtgcagaaggccagc
gtaggtaacctcctgggcttcctggaggacagtctagcagccacgcagtaccagcagagc
cagagttccatgatgcacctacagggggcgcactttgagcccactagcgtggacatgatg
cggcgagcggcccgcgccctgcatgccatggctaaggtggaggagaaccactcagagttc
accctgtatgagtcccgcctactggacatctctgtctcaccactcatgaactctctggtg
tcccatgtgatctgtgacgtactctttctgattggccagtcatga
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integrated database retrieval system
