Salvelinus sp. IW2-2015 (Arctic char): 111955994
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Entry
111955994 CDS
T05762
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111955994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111955994
03016 Transfer RNA biogenesis [BR:
salp03016
]
111955994
03012 Translation factors [BR:
salp03012
]
111955994
04131 Membrane trafficking [BR:
salp04131
]
111955994
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111955994
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
111955994
Transfer RNA biogenesis [BR:
salp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
111955994
Translation factors [BR:
salp03012
]
Eukaryotic type
Elongation factors
111955994
Membrane trafficking [BR:
salp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
111955994
Exosome [BR:
salp04147
]
Exosomal proteins
Proteins found in most exosomes
111955994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
111955994
NCBI-ProteinID:
XP_023832169
LinkDB
All DBs
Position
LG31:7757661..7761560
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMGWFKGWKVERKEGGANGVTLLEALDSILPPSR
PTNKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
AALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGNFTAQVIILNHPGTISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMVPGKPMCVESFAAYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASTGKVTKSAVKAAKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccaccaccaccggccatctgatctacaaatgcgggggtattgacaagagaaccattgag
aagttcgagaaggaggctgctgagatgggcaaaggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagcgtgagcgtggtatcaccatcgacatttccctgtggaagttt
gagaccgccaagtactacgtcacaatcattgatgcccccggacacagagacttcatcaag
aacatgatcactggtacctctcaggctgattgcgctgtgctggtcgttgctggtggtgtt
ggtgagtttgaggccggtatctcaaagaacgggcagactcgtgagcacgctctcctggcc
tacactctgggagtgaagcagctcatcgttggagtcaacaagatggactctactgagccc
ccctacagccagaagcgttttgaggaaatccagaaggaggtcagcacctacatcaagaag
atcggctataaccctgccacagtcgcctttgtgcccatctctgggtggcatggggacaac
atgctggaggctagccctaacatgggctggttcaagggatggaaggttgagcgtaaggag
ggtggcgctaatggtgtgacccttctggaggctctggactccatcctgcccccctcccgc
cccaccaacaagcctctccgtctgcccctgcaggacgtctacaaaattggaggtattgga
acagtgcccgtgggccgtgtggagactggaaccctgaaggctggtatgatcgttaccttc
gcccccgctaacgtcaccactgaagtcaagtctgtggagatgcaccacgagaccctggaa
gcggctctccccggtgacaacgtcggcttcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaagaacgaccctccaatggaggccggcaacttc
accgctcaggtcatcatcctgaaccacccgggcaccatctcccagggctatgcccccgtg
ctggattgccataccgctcacattgcctgcaagttcagcgagctcaaagagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaaggccctgaagtctggagacgccgcc
atcatcgtcatggtgccaggaaagcccatgtgtgtggagagcttcgctgcctaccctccc
ctcggtcgttttgccgtacgtgacatgaggcagaccgtggctgttggtgtcatcaaggcc
gtcgacaagaaggctgccagcactggcaaggtgaccaagtccgccgttaaggctgccaaa
gctaaatga
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