Salvelinus sp. IW2-2015 (Arctic char): 111956005
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Entry
111956005 CDS
T05762
Name
(RefSeq) claudin-7-like
KO
K06087
claudin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03272
Virion - Hepatitis viruses
salp04382
Cornified envelope formation
salp04514
Cell adhesion molecules
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
111956005
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111956005
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111956005
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111956005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111956005
04147 Exosome [BR:
salp04147
]
111956005
04515 Cell adhesion molecules [BR:
salp04515
]
111956005
Cilium and associated proteins [BR:
salp03037
]
Other cilia and associated proteins
Stereociliary proteins
111956005
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
111956005
Exosomal proteins of colorectal cancer cells
111956005
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
L1 family
111956005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
111956005
NCBI-ProteinID:
XP_023832188
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Position
LG31:complement(7542162..7544427)
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AA seq
232 aa
AA seq
DB search
MVNTGMQLISFTCAVTGWVMAIAVTALPQWKVSAFIGSNILTSEIKWEGIWMNCIYQTTG
HMQCKTYDSILALPPDLQAARALMCVAIFLGWLSCTVSCCGMKCTTCAGDDRRAKAGIAL
SGGVLFILTGLCVLVPVSWTANTVVQDFYNPKVPVMYKRELGQAIYLGWASAVILMISGA
VLSSTCPHIESGGREYRRGYMGRSFPNTRPSPLAPDPPKPITSNSVPLKEYV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacacaggcatgcagctgatcagcttcacctgcgcggtgacaggttgggtcatg
gccatcgccgtgacggccttgcctcagtggaaggtgtccgcctttatcggcagcaacatc
ctcacctccgagatcaagtgggagggcatctggatgaactgcatctaccagaccacgggc
cacatgcagtgcaagacctacgactccattctggctctgcccccggacctccaggcagct
cgtgccctcatgtgtgtggcaatttttctgggctggctgtcctgcacagtgtcctgctgt
ggaatgaaatgcaccacgtgcgctggcgacgaccgccgcgccaaggcaggcatcgccctc
tccggcggcgtgctattcatcctgacgggcctgtgcgtgctggtgcccgtctcctggacc
gccaacacggtggtccaggacttctacaaccccaaagtgcctgtcatgtacaagcgagag
ctgggccaggcgatctacctgggctgggcatctgcggttattctgatgatcagcggggcc
gtgctgagcagcacctgcccccatatcgagagtggaggacgggagtaccgccggggatac
atgggccggagctttcctaacacgcgcccctcccccctcgcacctgatcctccgaaacct
atcacctckaacagcgtgcccctaaaggaatatgtgtag
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