Salvelinus sp. IW2-2015 (Arctic char): 111956034
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Entry
111956034 CDS
T05762
Name
(RefSeq) tapasin
KO
K08058
TAP binding protein (tapasin)
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111956034
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Gene cluster
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Motif
Pfam:
V-set
ig
Ig_3
KOW6_SPT5
Ig_2
Motif
Other DBs
NCBI-GeneID:
111956034
NCBI-ProteinID:
XP_023832222
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Position
LG31:complement(9630960..9635846)
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AA seq
439 aa
AA seq
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MDNISTIYKLSFLAFTCFIHVYGTSCPVLECWFVQEKPGRGGGFPAAMIQEKSLLYINTD
PETKSQQGPSADINHDRVYYITDPAAILCSSSLHPPEGSVHKPQCEINPFMPQPSTVQWA
VPLTDSAHSPIYLQADWYSAALQGLDGQLGLSSVMRAPTATKEPTVVLSVSSRTPLVRSR
LGEPVVLDCGFWMEATSPLSGSGFAVEWRYQFRGDGRLILAYDGKTDRFAETKEKGAGLD
FTALHETGNASLILQEAEVRHTGTYICTVYLPYLLAQVAVELEIVEPPSLSIFPSPLPLS
VPGQVVKVQXEASGFFPLSLEFHWELTGPDGKVRPLGQGSVTGHRQGPDNTYSQTTRLEL
DSAKLDLGRGGEVTCVAVHPGGTRRASVTLNVIGVNGPSIEDSMAMVAVALGLYGLIKIV
SWTFSSGSDDTNSQEKKVK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggacaatatttcaacaatttacaagctatcgtttctcgcctttacttgcttcatacac
gtctatgggacaagctgtccagttctggagtgctggtttgtccaggagaaaccaggtcga
ggtggtggattccctgctgcaatgattcaggagaagtcactactgtatatcaatacagac
ccagaaaccaagtcacagcagggaccatctgcagacattaaccatgatagagtctactac
atcactgacccagcagccatcctctgcagttcctctctgcatccaccagagggctcagtc
cataaaccacagtgcgagataaaccccttcatgccccagccctccaccgttcaatgggca
gtcccgctcactgactctgcccacagtcctatctacctgcaagctgactggtactctgca
gccttgcagggccttgacggacagctgggcctgtccagtgtcatgcgtgctcccacggca
accaaggaacccactgtggtgctcagtgtgtccagtcgaacccccttggtccgttccaga
ctcggggaaccggtggttctagactgtgggttctggatggaggccacttctcctctctct
ggctctggcttcgccgtggagtggcgctaccagttcaggggcgatggacgtctgatcctg
gcctacgacggcaagactgaccgatttgccgagaccaaggaaaagggagcagggctagac
ttcacggctctgcacgagacaggaaatgcatcactgatcctgcaggaagctgaagtgcgc
cacacaggaacctacatctgcacggtgtacttgccctatctcctggctcaggtggcagtg
gagctggagattgtagagcctccgtccctctccatcttcccctccccgctccctctctcc
gtgcccggccaggtggtgaaggtgcaatgrgaggcgtcaggattcttccccctctccctg
gagttccactgggagttaacagggcctgacggtaaggtcaggcccctgggtcaaggcagc
gtgacaggccacaggcagggcccagacaacacctacagccagaccacccgtctggagtta
gactcagccaagctggaccttggccgtggaggggaggtcacctgtgtggccgtccatcct
ggaggcacccggcgggccagcgtcaccctcaatgtcatcggtgttaatggtccctccatt
gaagactccatggcgatggttgccgtggccctggggctctatggtttgatcaagatcgtc
tcctggacatttagctctgggtccgatgatactaactcacaagagaagaaagtgaagtaa
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