Salvelinus sp. IW2-2015 (Arctic char): 111956058
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Entry
111956058 CDS
T05762
Name
(RefSeq) ephrin-A1
KO
K05462
ephrin-A
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111956058
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111956058
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111956058
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
salp00537
]
111956058
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Growth factors (RTK binding)
111956058
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Axon guidance molecules
111956058
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
salp00537
]
Others
111956058
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
111956058
NCBI-ProteinID:
XP_023832241
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All DBs
Position
LG31:844935..858443
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AA seq
221 aa
AA seq
DB search
MDLVWSLCFVGSLCAWFASAERHSVYWNRTNAKFLWDDYAVEVRLNDYLDIVCPHYPLGE
VASQDAERYVLYMVEREDYDACKPQSYDQMRWECGHPFAPHAAEKFSEKFQRFTPFTLGK
EFRQGENYYYISKPLHHHGQECLRLRVDVVAADGSQEARVATGRAGAGGGAHNVSNRLPA
DDPVVILPDVQKSVRTNSAVSTASFSILSLMVXVLLLLSLQ
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtctggagcctgtgcttcgttgggagtctgtgcgcttggtttgcatctgca
gaaaggcacagcgtctattggaatagaacaaacgccaagttcctatgggacgactatgcg
gtggaggtgcggctgaacgaytacctggacatcgtgtgcccccactacccgctgggcgag
gtggcatcgcaggatgctgagcgctacgtgctctacatggtggagcgggaggactacgac
gcttgcaagcctcagtcctacgaccagatgcgctgggagtgcggccaccccttcgcaccc
cacgccgccgagaagttctccgagaagttccagcgtttcacccccttcaccctgggcaag
gagttccgccagggagagaactactactatatctccaaacctctgcaccaccacggacag
gagtgcctcaggctcagggtagacgtcgtagctgctgatggatctcaagaggccagggtt
gcaactggaagagctggagctgggggtggagcacacaacgtctccaacagactgcctgca
gatgacccagtggtaatcctgccagatgtccagaaaagcgtgcggacaaattcagcggtt
tcgacagcgtccttctccatcctctcattgatggtgcyagtcttattattactgtcatta
cagtga
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