Salvelinus sp. IW2-2015 (Arctic char): 111956107
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Entry
111956107 CDS
T05762
Symbol
matn1
Name
(RefSeq) LOW QUALITY PROTEIN: cartilage matrix protein
KO
K19467
matrilin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111956107 (matn1)
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
111956107 (matn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
VWA_3
cEGF
EGF_CA
EGF_3
EGF
Plasmod_Pvs28
DUF7326
vWA_SIBA-E
hEGF
FolB
EGF_LRP2
BRISC_FAM175B_helical
Motif
Other DBs
NCBI-GeneID:
111956107
NCBI-ProteinID:
XP_023832316
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All DBs
Position
LG31:complement(20404129..20430194)
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AA seq
496 aa
AA seq
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MIPSPPLFLLLLGLMGAHATAPVSVDLRTAAAMAAGLCNTRPTDLVFIVDSSRSVRPSEF
EQVKVFLAKVIEGLDVGPDATRVGVVNYASRVKNELSLKTHKTKAGLVKAVTKIEPLSTG
TMTGLAIQFALNVAFSEAEGARVKSPDISKVAIIVTDGRPQDNVKDVAARARDAGIELYA
IGVGRVDLNTLKQIASEQLDDHVDYVESYSVIEKLTKKFQEAFCDTVADLCATGDHDCQQ
VCISAPGSFKCACKEGFSLLEDGKSCSACSNAATDVVFLIDGSKSVRPENFELVKKWINQ
IVDKLDVSETKAHVGLVQYSSSVKQEFPLGRYNKQKDLKDAVKKMAYMEXGTMTGQALRY
LTTAALHQLVGHGPGVAKVGIVFTDGRSQDYVEDAAKKAKEQGFRMYAXGVGNAVEDELR
EIASQPTGEHYFYTADFKXMTAIAKKLQINICQEEDPCECDSVVKFQKKVEEALQALTKK
LEGVSKRIAALENKIV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgataccctctccgccattgttcctgttgctgctcggcctcatgggagcgcatgccacc
gctcccgtgtccgtggacctccgcaccgccgccgccatggcggcaggtctgtgtaacact
cgccctacagacctggtgttcatcgtggacagcagtaggagtgtgcgtccgtcagagttc
gagcaggtgaaggtgttcctggccaaggtcatcgagggactggatgttggacctgacgcc
acacgggtcggagtggtcaactatgccagccgcgtcaagaatgagctgtctctgaagacc
cataaaaccaaggcaggtctggtaaaggctgtgactaagatcgagcccctgtccactggc
accatgaccggccttgctatccagttcgcccttaacgtagctttcagcgaggctgagggc
gcccgcgtcaagtccccagacatcagcaaggtggccatcatcgtgacagacggtcgtccc
caggacaacgtaaaggatgtggcggcgcgtgcccgggacgcgggtatcgagctatacgcc
attggcgtagggcgtgtagacctgaatacgctgaagcagatcgccagcgagcagctggac
gaccacgtggactacgtagagagctactcagtcatcgagaaactcaccaagaagttccag
gaggctttctgtgacacagtggcggacctgtgtgccactggagatcatgactgtcagcag
gtatgcatcagcgcaccagggtcattcaagtgtgcctgcaaggagggcttcagtctactg
gaggatggcaaaagctgcagcgcctgcagtaatgccgccacagacgtggtgttcctgatc
gatggttctaagagtgtgcgtccagagaactttgagctggtcaagaagtggatcaaccag
atcgtagacaaactggacgtctccgagaccaaggctcatgttggactggtccagtactcc
agctctgtcaaacaggagttccctctgggacgttacaacaaacagaaggacctgaaggac
gcggtgaagaagatggcctacatggagnaggggaccatgacaggacaggccctgcgctac
ctgacgacagcagctttgcaccagctggtggggcacggccccggggtcgccaaggtcggc
attgtgttcaccgatggacgcagccaggactacgtcgaggacgccgccaagaaggccaag
gagcaaggttttaggatgtatgctngtggcgtgggtaatgctgtagaggatgagttgagg
gagatagcatcacagccaacaggagaacactacttctacactgcagatttcaaangcatg
acagccatcgctaagaagctgcagatcaacatctgtcaagaggaggacccatgtgaatgt
gactctgtcgttaagttccagaaaaaagtagaagaagccttacaggcactaacgaaaaaa
ctggagggcgtgtcgaagaggatcgctgcactggagaacaagattgtctga
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