Salvelinus sp. IW2-2015 (Arctic char): 111956111
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Entry
111956111 CDS
T05762
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1-like
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04020
Calcium signaling pathway
salp04148
Efferocytosis
salp04218
Cellular senescence
salp04310
Wnt signaling pathway
salp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111956111
04310 Wnt signaling pathway
111956111
04020 Calcium signaling pathway
111956111
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111956111
09143 Cell growth and death
04218 Cellular senescence
111956111
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
111956111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111956111
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
111956111
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
111956111
NCBI-ProteinID:
XP_023832322
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Position
LG31:complement(4551940..4638937)
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AA seq
864 aa
AA seq
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MKSAEEDAYSHTPNVSLSQGNPCMPSQYHSLQSGPTISVSISQPPSYGAHNNMRTVGYYS
SPGIRPNGAPALESPRIEITAYGQFPEDKVEESNNLTVAKRVNSIVTLTLPNADGYRDPS
CLSPASSVSSRSCHSEASSYESGFSYNYENSPQNSPWQSPCVSPXGSSSLALPGEACTHA
GSPHNSPSTSPLTSVMDDSWMGQRGSRPNSPCGGKRKYSFNGTXTXKYPYSPNHSPGPSP
HTSPRLSVTXESWMPNNTNQYTNSAIVAAINALTTDGVADLGEGIPLKARKTSLEPGAVF
CLKVEPGGEELSAGELCQDEYPFSRLPFKKENYCGGFLDVPQHPYSWSKPKQYVSPSLPA
LDWQLPSSSGPYSLQIEVQPKSHHRAHYETEGSRGAVKALAGGHPVVQLQGYMESEPLTL
QLFIGTADDRLLRPHAFYQVHRITGKTVSTPSHEVLQSNTKVLEIPLLPENKMRAIIDCA
GILKLRNSDIELRKGETDVGRKNTRVRMVFRVHINQPTGRTLSLQAASNPIECSQRSAQE
LPLVDKQTLETCPAAGGERMLLSGHNFQHDSKVVFMEKSQDGHHLWETEAKVDKDSSKST
SLLIEIPPYRNQRISNPVQVNFYVCNGKRKRSQYQHFTYMSANVPMIKTEPNDDYDPPQV
CPQRGPGLALHPKPYYTPQVMTSIIPTELRPCVGGAYSTCQRRLGGKPSSLSSSSSPSTS
PKLHDLSPTTPFSKCLSAGPSQSPIPHVSIIQESPGCYQPQSVLYPPSSASSSPGSQPST
PDTSGPEAPFSPTHCLTPPQPISGSSSPVTQQFSKVPERGSRSSSPTLAINIKQEPEELD
QMYLDDVNEIIRNDLSSISVHSHA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgctgaagaggatgcatacagccacacccccaatgtcagtctctcccagggc
aacccctgcatgccttcccaataccacagtctccagtctggccccaccatctcagtgtcc
atcagccagcctcccagctacggcgcccacaacaacatgaggacagtgggttactactcc
tcccctggcatccgtccaaatggggcgccagccctcgagagccctcgcattgagatcaca
gcctacgggcagtttcctgaggacaaggttgaagagagcaacaaccttactgtggctaaa
cgggtcaactccatcgtgaccctgacgttgcccaatgcagatggctaccgtgaccccagc
tgcctcagcccggccagcagtgtgtcgtcacgcagctgtcactccgaggcctcgtcctac
gagtcgggcttctcctacaactaygaaaactcaccccagaactcgccctggcagtcgccc
tgcgtctcgcccargggctcctcctctctcgccctgccgggtgaagcttgcacccatgcg
ggctccccacataactccccctctacctcccccctcaccagtgtcatggatgacagctgg
atgggccagcgaggctccaggcccaactccccttgtggtggmaaragraaatacagcttc
aacggaaccrcaacctmcaagtacccctactccccyaaccactccccygggccgtcccct
cacacctccccacgcctcagygtcacagrygagtcstggatgcctaacaacaccaaccag
tacaccaactcagccatagttgcagccatcaacgctctgaccacagacggtgtggcagac
ctgggggagggcatccctctgaaggcccggaagaccagcctggagcctggggcagtcttc
tgcctgaaggtagagcctggaggagaggagctcagcgctggggagctctgtcaggatgag
taccccttctcccgcctgccctttaagaaggagaactactgtgggggattcctggatgtg
ccacagcacccatactcatggtctaagccaaagcaatatgtcagcccatctctaccagcc
cttgactggcagctgccatccagctcggggccgtacagcctgcagatcgaggtgcagccc
aaatctcaccaccgtgcccactatgagaccgaagggagcagaggggcagtcaaggctctg
gcaggaggacaccctgtggtgcagctccaaggctacatggagagtgagccactgaccctg
cagctgttcattggtacggcagacgaccgtctcctgcggccccatgccttctaccaggtc
caccgcatcaccggcaagaccgtctccactcccagccacgaggtcctacagtccaacacc
aaggtgctggagattccactgctgcccgagaacaaaatgcgcgccataattgactgcgcc
ggcatcctgaaacttcgcaactcggacatcgagctgaggaagggcgagacggacgtcggg
cgtaagaacacacgtgtgaggatggtgttccgggttcacatcaaccagcccacaggaagg
acattgtccctgcaggctgcatccaaccccatagagtgctcccagagatcagcccaggag
ctgcccttggtggataagcagaccttggagacgtgccctgctgctggaggagagaggatg
ctcctcagcggacacaacttccagcacgactccaaggtggtgttcatggagaaatcccaa
gatggccatcacctatgggagacagaggccaaggttgacaaggactcctccaagtctaca
tctcttctcattgaaatccctccttatcggaaccagaggatatccaatcctgttcaggtg
aacttctatgtgtgcaatggcaagaggaaaaggagccagtaccagcacttcacctacatg
tctgccaatgttccaatgataaaaacggagccgaatgatgactacgacccccctcaggtg
tgtccccagcgtggacctggcctggcgcttcaccccaagccctactacaccccacaggtc
atgacctccattatacccacagaactccggccgtgtgtggggggcgcctactccacctgc
caacggagactgggagggaagccttcctcactgtcctcctcatcctcccccagcaccagt
cccaaactgcatgacctgtcacccacaacgcccttctccaagtgcctgtcagcaggccca
tcccagtctccgatcccacatgtctccatcatccaggagagtcctggatgctaccagccg
caatctgtcctctacccacccagtagtgcctcatcctcaccaggctcacagccctccacc
cctgacaccagcggcccggaagccccgttctcccccacccactgcctaacgccgccccag
cccatcagtggcagctccagcccagtgacccaacagttctccaaagtgccagagagaggc
agccgctcctcgagccccacgttggccattaacatcaaacaggagccagaggaactggac
cagatgtacctagatgatgttaatgagatcatcaggaacgacctctcaagcatctctgtc
cacagtcatgcgtag
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