Salvelinus sp. IW2-2015 (Arctic char): 111956171
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Entry
111956171 CDS
T05762
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
salp04080
Neuroactive ligand-receptor interaction
salp04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111956171
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111956171
04081 Hormone signaling
111956171
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
salp04030
]
111956171
G protein-coupled receptors [BR:
salp04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
111956171
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
7TM_GPCR_Srx
7tm_4
Bac_export_2
DUF6556
DUF4834
Motif
Other DBs
NCBI-GeneID:
111956171
NCBI-ProteinID:
XP_023832389
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Position
LG31:4202452..4206185
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AA seq
399 aa
AA seq
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MENVTEAQDNQTWGTWTDQIIEYKVVSTLLVFVICAFGIVGNVMVILVVLTTKHMRTPTN
CYLVSLAVADLIVLTAAGLPNITDSIFGSWVFGRSGCLGITYLQYLGINASSCSITAFTI
ERYIAICHPIKAQLLCTLSRAKKIILFVWGFTLLYSVMWFYLSDIKEEAYENDVTIVICS
YKVSRQLYLPIYFLDFGIFFVVPLMLATILYGLIARILIMNPLPSERKDKSKNEQSNTTR
GCKNSHHTSTTATSRRQVTKMLAVVVILFAVLWMPYRTLVVVNSFLEQAYMNTWFILFCR
SCVYLNSAINPIIYNAMSQKFRAAFRKLCLCGRKGSEKPTGGTYGVALTYSVVKDTSMVE
TTDQFNTELDEITVTCELPDKKMVFQDTCVYSKVTLCND
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgttactgaagcmcaagataatcagacttgggggacttggacggaccaaata
atcgaatacaaagtggtgagcactttgttagttttcgtgatatgcgcctttgggatcgtt
ggtaatgttatggtgatcttagtggtgcttaccactaaacacatgaggacacccaccaac
tgctacctggtgagcttggccgttgcagatctcatcgtactaactgcggcgggcttaccg
aatatcacggacagcatcttcgggtcttgggtgttcggccgctcaggatgtctcggaatc
acctacctccagtacctgggaatcaatgcatcgtcctgctctatcaccgcctttaccatc
gaaaggtacatcgctatttgccacccgataaaagcccagttgctgtgcacactgtccaga
gccaagaagataatattgtttgtctggggtttcactttactctactccgtcatgtggttc
tacctgtcagatatcaaagaagaagcatatgagaacgacgtgaccatcgtgatatgcagc
tacaaagtttcaagacaactctatttgcccatttactttttggatttcgggatatttttt
gttgtgccgcttatgctggctaccattctgtatggtctcatcgccagaatcctgatcatg
aatccgttaccttctgaacgcaaggataaaagtaaaaatgaacaaagcaacacaacgagg
ggatgtaaaaactcccaccacaccagcactaccgctacttctcggagacaggtgaccaag
atgctggctgtggtggtgatcctgttcgctgtgctgtggatgccgtaccgcaccctggtg
gtggtaaactccttcctggagcaggcctacatgaatacctggtttattctcttctgtcgg
agctgtgtctacctcaacagcgcaatcaaccccatcatctacaatgctatgtcgcagaag
ttccgtgccgccttccgcaagctctgcctctgcggacggaaaggctctgagaagcctacc
ggcggcacgtacggtgtggcgctgacctacagcgtggtcaaggacacatctatggtggag
acgacggaccaattcaacacagagctggacgagatcacggtaacctgtgagttgcctgac
aagaagatggtgtttcaggacacctgtgtgtacagcaaggtgactttatgcaatgactga
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