Salvelinus sp. IW2-2015 (Arctic char): 111956225
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Entry
111956225 CDS
T05762
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111956225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111956225
03032 DNA replication proteins [BR:
salp03032
]
111956225
Spliceosome [BR:
salp03041
]
Complex A
U1 snRNP components
Sm proteins
111956225
U2 snRNP components
111956225
Complex B
U1 snRNP components
111956225
U4/U6.U5 tri-snRNP components
111956225
Complex C
U2 snRNP components
111956225
DNA replication proteins [BR:
salp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111956225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
Hfq
SM-ATX
Phage_Hfq
API5
Motif
Other DBs
NCBI-GeneID:
111956225
NCBI-ProteinID:
XP_023832448
LinkDB
All DBs
Position
LG31:21311919..21315493
Genome browser
AA seq
158 aa
AA seq
DB search
MTPVLLRRNVFYTQRPVRSVIRCNFLSLVEILSLQSITNMKLVRFLMKLSHETVTIELKN
GTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSIRGNNIRYFILPDSLPLDTLLV
DIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggtgttgctgcgacgaaacgtattttatacacagcggcctgtgcgctcagtt
atacgctgtaattttttgtctttggtggagattttgtctctacaatccatcaccaacatg
aaactcgtacgctttttgatgaaactcagccacgagactgtgaccattgagctgaagaat
ggaacccaggtccatggaactatcacaggtgtggatgtgagtatgaacactcacctgaag
gcggtaaagatgactctgaagaaccgtgagcccacccagctggagagcctcagtatccgt
gggaacaacatcagatacttcatcctgccggacagcctgccgctggacactctgctggtc
gacatagaacccaaggtcaagagcaagaagagagaggctgtggctggacgtggcagaggc
agaggaagagggcgtggcagggggaggggccgaggcaggggagggcccaggagatga
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