Salvelinus sp. IW2-2015 (Arctic char): 111956263
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Entry
111956263 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: GRB10-interacting GYF protein 2-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111956263
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111956263
Surveillance factors
Other surveillance factors
111956263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
111956263
NCBI-ProteinID:
XP_023832473
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All DBs
Position
LG32:complement(14579380..14628010)
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AA seq
1407 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGGHGGGSSSSVATSPPLSPALPKYKLADYRYGREEMLALYV
KDREIPVDLHDKDFLPILQEEPLPPLALVAFTEEEQRNFSMSVNSAAVLRLMGRGGGPVG
PGAPRGRSTSRGRGRGRGDGGFYQRSFDDVEGGFGRGGREMHRSQSWEERGDRRFEKPGR
KDSEVAPAHFPMNHIRANYEDVGTGVGCLPVRKHDFTRSESENWRTSRDEANGEDGDEGG
WLLAGASRRDRWCPPSPDVLRSAVRREVHPGEQPRQRRFPFDAREDERGYRRPRSGSGSL
EEDGGSLPEWCLEDAEEETGTFDSSGAFLSLKKAPKEPILEEAELDFRPLEECDEGLEED
GQPRETKNPDGEARRDPDRKQSVGRGVVEAPPAPSPPEPQPSAPLLPPSQPDRAEEPERP
LERTPAPEHRPEVNKVPLHVPMSMPMSNTMLESLPIPHTAAHTLTVSPVSAKSSTIQMQQ
KPPDVPVAMPVPLPFSTSLMAQSTSIMTPNIMAPSTGLMAPIGRPTVMPPHHTMVEDERL
KHFEQEAEKMVAYLQDSDNRLAAKSSAPKPAGLPLTHEAALKWFYKDPQGEMQGPFSNPE
MTEWFQAGYFTMTLLVKRGCDEVFQPLGEIIKMWGRVPFAPGPAPPPLLGDAGDQERLKL
QQELTALNLYQLQQLQYQYLLRQQYAQALAQQKAQALSSAPHQQQQQQQQQINLLLQQYQ
ALKMRTSENLLPPVTRSMSVPDSQGSVWEMQHPTSQVSCTPNIQQPAPSAWEGSSVWDLP
IDSMAQAPTIEQMQQLEKSKAAKVSPPHLLEMERREAELRAKREEEEKERKRLEEALRAR
QEAERKRLEEELSRHKQEEELRQREQEAQRRQKEEEERQAQEEALRRLEERRREEEERKQ
REEFLHKQEEERRKQEEERRKQQEEERREEERRKQEEERRMQEELEALRRCEEEKRLEEE
AVAAAVALARQQQEEAKRREQEAARQQELARQRQQQQEALRRLQLQQQQQQLAQMKLPSS
SKWGQQSAVTAAAISQSQNALSLAEIQKVEEERERQAREEQRRQQAELLKLQQQQALQXA
LQPQAKLSGWGSVAKQPAATKSLLEIQREEAQQVKQXKEQGXGSQQPSHPTVTQQNRAQN
RATTALSSSVWGSVATSSMGGGAPNWGGESSSIWGDSTNSNMGFWDEAVKEAAQPPPQAP
PPTRKPNAQKNNKANANLSSRANKKVEEEEKLLKLFQGVNKSQQDGFMQWCEQTLHTLNT
ANNLDVPTFASFLKEVDSPYEVHDYVRAYLGDTSEAKEFAKQFLERRAKQKANQQKEPQA
PQNQQPTLKQRQQQQDSVWGVSGTGSQTRYQSNHTSLQQQARFETVTSGKKKKKQKMVRA
DPSLLGFSVNAASERLNMGEIETVEDF
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactcagacactcaactttggaccagaatggctccgggccctgtctgggggt
ggccatgggggtggtagcagcagtagcgttgccacctcaccaccactctctcctgcattg
ccaaagtataaacttgcggactaccgctatgggagagaagaaatgctagcactttatgtc
aaggatagggagatccctgtagacctacatgataaagattttctgcccattttacaagag
gagcccctgccaccgctggcacttgtagcttttacagaggaagagcagagaaatttctcc
atgtctgtaaacagtgcagcggtgctcaggctgatggggagaggagggggtccggtgggg
ccaggggcaccgaggggtcgaagtacttcacggggaagaggacggggtagaggagacgga
gggttttaccaaagaagttttgatgacgtggagggaggctttggccgcggaggcagggag
atgcaccgctcccaaagctgggaggagaggggagacagaaggtttgaaaagccaggtcga
aaagattcagaagttgctcctgcccactttccgatgaatcatatccgtgctaactacgag
gatgttgggaccggcgtgggatgcctgcctgtgaggaagcacgattttacacgctcggag
agcgagaactggcgcacgtcccgtgacgaagcaaatggtgaggacggtgacgaggggggc
tggctcctggcgggtgcctcgcgacgcgaccggtggtgccccccgagtccagacgtgctg
cggtcggcagtgcggcgagaggtgcacccgggggagcagccacggcagcgccggttcccg
ttcgacgccagagaggacgagcgcggctacaggcgtccccggtcaggcagtggcagcctg
gaggaggatgggggcagcctgccagagtggtgcctggaggatgctgaggaggagacgggc
acctttgattcctccggagccttcctctcgctcaagaaagctcccaaggagcccatcctg
gaggaggcagagctggacttcagacccctggaggagtgtgacgagggccttgaggaggac
ggacagccccgggagaccaaaaacccagacggagaggcaagaagagaccccgacagaaaa
cagagtgtggggagaggggtagtggaggcgccgcctgctccctcgcctccagaaccccag
ccctccgcccctctgctgccccccagccagcccgacagagcagaggagcctgagaggcca
cttgagcgaaccccagccccggaacacaggccagaggtcaacaaagtccccctgcacgtc
cccatgtcgatgcccatgtccaacacaatgctggagtccctccccatcccccacaccgca
gcacacactctcacagtgtctccagtgtcggccaagtcgtccaccatccagatgcagcag
aagcccccggacgtgcccgtggctatgcccgtcccgctgcccttcagcaccagcctcatg
gctcagagcacgtctatcatgacccccaacattatggcccccagcacgggcctcatggct
cctattggaaggcccacggtcatgccgccacaccacaccatggttgaagatgagagactg
aagcactttgaacaggaagcagagaagatggtggcgtatctacaggacagtgacaaccgg
ctggctgccaagagctcagcacccaaaccagctggcctgccgctcacacacgaggctgct
ctgaagtggttctataaagacccccagggagagatgcagggtccgttcagtaacccggag
atgacagagtggttccaggcaggctacttcacaatgaccctgctggtgaagagaggctgt
gacgaggtcttccaacccctgggggagatcatcaaaatgtggggcagggtccccttcgcc
cctggaccagcaccgccacccttactgggtgacgctggggaccaggagcgtctgaaactg
cagcaggagctgactgccctcaacctgtaccagctgcagcagctgcagtaccagtacctg
ttgaggcagcagtacgcccaggccctggcccagcagaaagcccaggccctcagctcagca
ccacaccagcagcagcagcagcagcagcagcagatcaacctgctcctccagcaataccag
gccctcaagatgagaacatccgagaatctcttacctccggtgacgcggtccatgtctgta
ccagactcccagggttctgtgtgggaaatgcagcaccccacctctcaggtctcttgcaca
ccaaacatccagcaacctgccccaagtgcgtgggagggcagcagtgtgtgggatctgccc
atagactccatggcccaggcccccaccatagaacagatgcaacagctggagaagagcaag
gctgctaaggtctctcctcctcatctactggagatggagcggcgtgaggctgagctgagg
gccaagagggaagaggaggagaaggagaggaaaagactggaggaagcgttacgggcccga
caggaggcggaacgcaaacgcctggaggaggagctatcacgtcataaacaggaggaggag
ttgaggcagcgggagcaggaggcacagcgcagacagaaggaggaagaggaacggcaggca
caggaggaggccctccgcagactggaggaaaggaggagggaggaggaagagcggaagcaa
agggaagagtttctccataaacaggaggaggagcgccggaagcaggaggaggagcgccgg
aagcagcaggaggaggagcgccgggaggaggagcgccggaagcaggaggaggagcgcmgg
atgcaggaggagctggaggccctgaggaggtgcgaggaggagaagcggctggaggaggag
gcggtggcggccgcggtggcgttggcacggcaacagcaggaggaggcgaagaggagggag
caggaggcggcgaggcagcaggagctagccagacagaggcaacagcagcaggaggcgctc
cgccgactacagctgcaacagcagcagcaacagctagcccagatgaagctgccgtcgtcc
tctaagtggggccagcagtcagcagtcacggcagcagccatctcccagtcccagaacgcc
ttgtcgcttgctgagatccagaaagtggaggaggagagggaacgacaagcacgagaagag
cagcggcgccagcaagcagagctcctaaagctccagcagcagcaggccctgcaggasgcc
ctgcagcctcaggccaagctctctggttggggcagcgtggccaagcagccggccgccacc
aagtccctgctggagatccagagggaggaggcccagcaggtgaagcagargaaggagcag
ggggktgggagccagcagccmagtcaccccaccgtcacccagcagaaccgcgcccagaac
agagctaccactgctctgagttcctcagtgtggggctcggtggccaccagcagcatgggc
ggcggggctcctaactggggcggggaaagcagcagcatctggggcgacagcacaaactcc
aacatgggcttctgggacgaggcggtgaaggaggcggcccagcccccgccacaggcccca
ccccccaccaggaagcccaacgctcagaagaacaacaaggccaacgccaacctcagcagt
cgggccaataagaaggtggaggaggaggagaagctgctgaagttgttccagggggttaat
aagagccagcaggatggcttcatgcagtggtgtgagcagaccctgcacaccctcaacacc
gccaacaacctggacgtcccgacatttgcgtctttcctgaaggaggtggacagtccgtac
gaggtgcacgactacgtgcgcgcctacttgggggacacatccgaggctaaggagtttgcc
aagcagttcctggaacgccgtgccaagcagaaggccaaccaacagaaagagccccaggcc
ccacagaaccagcagccgactctcaaacagcgacagcaacagcaggattcagtrtggggc
gtgagcgggacgggctctcagactcggtaccagtcgaaccacacaagcctccagcagcag
gcacgtttcgagaccgtcacctcagggaagaagaagaaaaagcagaagatggtccgggca
gaccccagcctgctaggtttttctgtgaacgcggcgtctgagaggttgaatatgggcgag
atagagacggtggaggacttttaa
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integrated database retrieval system
