Salvelinus sp. IW2-2015 (Arctic char): 111956444
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Entry
111956444 CDS
T05762
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111956444
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
111956444
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans_N
cNMP_binding
Ion_trans
LPD1
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
111956444
NCBI-ProteinID:
XP_023832659
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Position
LG32:complement(35692934..35764326)
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AA seq
1087 aa
AA seq
DB search
MPNVMDKNEVSPGSSAATMKKKAAGSSGCSHISAPKAATSNCTRSKSSNCVDSAPAAAAS
QSAPNVKQPGEASNAVIDEAEDGEDESKFQYPRLRRTGGSGSGGGGGGGGGSIRMKNFTP
GGGAAATATRKNSTNNEPTLLQTEGAPAATKPTVTSKATDTTTCPGDAAGRCETNRAAGA
EAYGAAVAVEVLNAAAGDACNNSTAPISRMKCNKNGECRRDSGTGSLRSIISNKTAGAGR
AEDASLRRGACNSARASMDGSATGSMTQGQGEGSANPGVTPVSTGVPEKKDSRVSFSNAP
SRKASSSLHGSTQTQTTQQPRNSVTFQKPEDGPQIQAEDAEADGSTFMQRQFSAMLQPGV
NKFSLRMYGSQKAVEREQERVKSAGNWIIHPYSDFSLPSELPHLCILSPSVELPQLCILS
PSVKLNLIFCIISPHSSYLISIFHMTYDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPML
QDFPQDCWVSLNKMVNDTWSELYSFAVFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVG
ATCYAVFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPSDFRQKIHDYYEHRYQGK
MFDEDSILEELNEPLREEIVNFNCRKLVASMPLFANAEPNFVTAMLIMLRFEVFQPRDYI
IREGTIGKKMYFIQHGVCNVITKGTLGMKLSDGSYFGEICLLTRGRRTASVRAETYCRLY
SLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSGVFNNHENEMI
QEIVKYDREMVKLVDLQRPRTMSMTSSVPGGMFSPAGPSGVGALASLQQAVAMSFCPQGM
GPMGGMGMPGMGPMGSGTLQSPRMLRRFQVVHSLSQSPVSASPLQSQPPQMAHATGVFGS
AISSPPVQSPLAHPGRTFQYMGGAGPSGSQLSLVQHHVPSPTHTIQRPSSHKSTHSLHSG
TLSQDARVLSASQLSLPQDGTPPAGPSPPQSTHPSTHASSTSIGPPQPTHPSQPGPSGVG
VQVGGRPAGVPQRVAFASTPPPGGAPGMGAAAAAAGSGLPASGAPKKDSIVSIPELDSAR
NRLSSNL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatgtcatggacaagaatgaggtttcaccaggctcatctgctgcgaccatgaaa
aagaaggcggcaggcagtagcggatgtagccacatcagcgcgcccaaagctgccacgtcc
aattgtacgagaagcaaaagcagcaattgtgttgactctgcccccgctgctgctgccagc
cagagcgccccgaatgtgaagcagcccggcgaggccagtaacgctgtcatagacgaggcg
gaggacggtgaggacgagtccaagtttcagtatccgcgactgcgccgaaccggggggagc
ggcagtggcggtggtggtggaggcggaggcggtagtatcaggatgaagaactttacgcca
ggagggggagccgcggccacggctaccagaaagaactccaccaacaacgagcccacccta
ctgcaaacagagggtgcgcctgctgctactaagcccactgtaacatccaaagcgactgat
accacaacctgtccgggagatgctgctgggcgctgcgagaccaacagagcggcaggggca
gaggcgtatggagcagcggtcgcagtagaggttttaaacgcggcagcaggtgatgcttgt
aacaacagcaccgctccaatttcaagaatgaaatgcaacaaaaacggagaatgcaggagg
gactccggcaccgggagcctgcgctcgatcatctccaacaagactgccggggcggggagg
gccgaggacgcgtcccttaggcgtggtgcctgtaactcagccagggccagcatggatggc
tccgcgacaggctccatgacgcagggccagggggaaggtagcgcaaaccccggcgtcacc
cctgtttccaccggcgtccccgagaaaaaggactccagggtgtccttctccaacgcgcca
agcaggaaagcctcctcatcgctgcacggctcgacccagacccagacgacccagcagcct
agaaactctgtcaccttccagaagccggaggatggaccccagatccaggccgaggatgcc
gaggctgacggaagcaccttcatgcaacgacaattcagtgccatgctgcaacctggagtt
aacaaattctccttacgcatgtatgggagtcaaaaggcggtggagagggagcaagagcgg
gttaaatcagcgggcaattggattatccacccctacagtgatttcagtctaccctcagag
ctacctcatctctgtatcctcagtccctcagtcgagctacctcaactctgtatcctcagt
ccctcagtcaagctcaacctcatcttctgtatcatcagtcctcattcaagctacctcatc
tctatcttccatatgacctatgacctggccagtgcagtaatgcgcatcttcaacctgatt
ggtatgatgctgctgctgtgtcactgggatggctgtctgcaattcctggttcccatgctg
caggacttcccccaggactgctgggtctccctcaacaagatggtgaatgacacatggtct
gagctgtattcatttgcagtgttcaaggcgatgagccacatgttgtgtatcggctacggt
cggcaggccccggagagcctgtctgatatctggctcaccatgctcagcatgatcgtaggg
gccacctgctacgctgtgttcataggccatgccaccgcactcatccagtccctggactcg
tcccgacgacagtaccaggagaagtacaaacaagtggagcagtacatgtctttccacaag
ctgccgtccgacttccgacagaaaatacatgactattatgagcaccggtaccaggggaag
atgtttgatgaagacagcatcctggaggaactgaacgaaccactcagagaggaaattgtc
aatttcaactgccgtaagctggtggcgtccatgccgctgttcgccaacgcagagcccaac
tttgtgacagccatgctgatcatgctccgcttcgaggtcttccagccccgtgattacatc
atcagagagggcaccatcggcaagaagatgtacttcatccagcacggagtctgtaacgtc
atcaccaagggaaccctgggaatgaagctctctgatggctcctactttggagagatctgt
ttgctgacgcggggtcggcgtacggccagcgtcagagcggagacgtactgccgtctctac
tccctgtctgtggacaactttaacgaggtgctagaggagtaccccatgatgagacgggcc
tttgagaccgtggccatcgaccgactggaccgcataggcaagaagaactccattctgatg
cacaaagtgcagcacgacctcaactccggcgtcttcaacaaccacgagaatgagatgatc
caggagattgttaagtacgaccgtgagatggtcaaactggtggacctccagagaccccgc
accatgtccatgacatcctccgtccctgggggcatgttctcccccgcaggcccatccggg
gtcggggccctcgccagcctccagcaggctgtggccatgagcttctgcccccaggggatg
gggccgatggggggaatggggatgccggggatggggccgatggggtcagggacgctgcag
tccccccgcatgttgcggaggttccaggtggtccatagcctgtcacagagccctgtttcc
gcatctcctctccagtcccagccaccacagatggctcatgcaacaggagtgtttgggtcg
gctatttccagcccaccagtccagagccctctggcgcatccaggacggacattccagtac
atggggggagcggggccgtctgggtctcagctgtccctggtgcagcaccacgttcccagc
cccacgcacaccatccagaggccctcctcacacaaaagcacccactcgctccactcaggc
accctgagccaagacgcccgtgtcctctccgcctcccagctctccctccctcaggatgga
acccctcctgccggccccagccctccccaatctacccacccatccacccacgcctcctcc
acctccatcggcccccctcagcccactcaccccagccagcctgggccctctggggtgggg
gtccaggttggggggagacccgcgggagttccacagcgggtggccttcgcctccactcct
cccccaggaggagcacccgggatgggggcggctgcagcggcggctgggtcggggctcccg
gcctctggagctcctaagaaggattcgatcgttagcataccagagttagactcagcccgg
aaccggctgtcttccaacttgtga
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