Salvelinus sp. IW2-2015 (Arctic char): 111956590
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Entry
111956590 CDS
T05762
Name
(RefSeq) laminin subunit alpha-3
KO
K06240
laminin, alpha 3/5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111956590
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111956590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_I
Laminin_B
Laminin_G_2
Laminin_II
Laminin_G_1
BORCS6
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
111956590
NCBI-ProteinID:
XP_023832851
LinkDB
All DBs
Position
LG32:complement(24427326..24472620)
Genome browser
AA seq
2306 aa
AA seq
DB search
MSGQCQCRKNIVGRTCNEPAPNYYFPSLHHLRYEVEDGITPNARPVRFGYDPKEFPEFSW
RGYAIMSPAQPEVILSLAVGFPGPFHIVFRYITTTPLRPTQGWWHRGRVRARILVVDESG
FHSCCDWSGQSKEVVFPPSSSPAYLTVPGDGFTELFSLTPGKWIIRIRAEGLLLDYLVLL
PSDYYEAPVLQEKITQPCTYTSTANRDANCLLYKHVAMDRLSSVLGSQGLFSSRRRRRSR
QARVHRPTPDHPDMASLTGRQAQLQLNLRVSRPGPYILVLEYASEVDMVQNINLIITGQS
ESQIQARANIYSCQFSFLCRSVAVDGINRMAVFQLTHKAELLLQTSTASLLLYKVYAVPA
EEFSMEYVNPKVLCVSIHGRFTEDSQYCVPSQYDRPSSALVLDAARDGRLSSHRVVPQQR
EIEEWRQRRQSGAGGFPLPGVQSEGVLLKSPQTEISFSARVEAPGRYVFVVHYCQPEHTT
FPVEVRVEAGRTWTGFVNASFCPGVSCCRKVVIAERRIALDLPQQDVAISLKVPPGKTLT
LDYILVVPDDSYTPDLLKEKPLDKSSDFARQCEGQGFYIDPRTSSHFCQVSTRSLVAAYS
DGALPCYCDKSGATGPTCNPVGGQCPCRPHVIGRQCTRCATGYYGFPYCKPCECGQQLCH
EVTGQCICPPQTVKPTCDVCESQTFSYHPLVGCEGCDCSPSGVRPNAGRDCDRDTGQCIC
KPRIGGRQCDRCAAGFYRFPECLPCSCNQGGVTTDVCHPDTGQCLCKRNVQGARCDACRD
GSFHFDPSHPRGCMSCFCFGANSQCQSTHKHRGKFVDMRGWRLERADQEEVASVLNPSSN
TVVADIQELPGTTQLLHWVAPPSYLGDRVSSYGGYLTYQAKSFGIPSEGMSLLDRRPDVL
LSGKEMALVHMAPKTPEPDRLHQGRVQLVEGNWRHADTNRPVSREDLMVVLAGLVAMRVQ
ALYFTQSQRLSLGEVGLEEATDTGAGGPASTVEQCACSPLYRGDSCQKCATGYYRDGSGP
YLGRCVPCSCNGLANECDERTGRCLNCQYXTAGDRCERCKEGYYGDAAQRSCRVCPCPFS
VPANSFAVGCREAAGGFQCVCKQGYAGDRCERCAPGYYGDPSTAGGSCRPCDCNGNGNNC
DPRTGVCRNTLEPGDTNTDEQCQECDNCAKTLINDLQRLDEELGRIKTQLDSASISASSQ
DRLRKLENAITETKSLVNKFSSSVNSQKPKVSQLEQDTLSVNEDINALKGKADARAVDAQ
RVLEDVGKTHLRAKDLDTEAKNLLKKILALLQQLNESGSSGGVVPSENLAKMLSEAESMV
KEMEKRNFNPQKDTAEKESDEAQKLLDYIKANVTKQYDQNEAAAKRVKGLLKDYAAKLKD
LEEALKQAGDMVKKANSQNGLNTEALEDILKHMEDLRKEHKKVQDQIAMAEDQLKDTKDL
LRMLDDRKTEYEQLAAQLDGARTDLTKKGNAMSQAAAKEDIVERAEKHAENLAKLAKELQ
DAVRDSSGRSDVRDAMDAIKAYKNITDAVNAAEKAAKEAKDAADKALKDVKKEDLTKRAK
NLKDSGNDLLREAGDAEQDLKEASDHLTAQKKHLKDAEKKKKALEKDLMDAQAELNNIMR
DDIGDMLDGAKSKAASANDTASTTMDRLNAIREEVDKINVMPSDSNLSSVMDDVNKSVKN
LLNTIPSLQDKISEVEELSSQLSPVTNISENIKRIKELIEQSRDAANRIVVPMKFSGEGH
VEMRPPRDMEDLKAYTTLSLSLQRPVNPDIGRGDGTRRRRQDSTTTDKGDMFVLYLGNKD
SSKDYIGMALRKNVLFCVYKLSGEEYEIKTDYITRSPSEPAFFDKVDLHRIYQDAQVILT
KLFTSNDPDPPQTSSKQGELTRNLLNLNHSDVVFYVGGYPSNFTPPASLNYPNYKGCIEL
STFNDRFISLYNFKKAVKINLETPCKRYMQPVVFDYFEGTGYAKVSTQGVMASTLLLTQT
ISTRSENGLLLYIGNEYNYYCVTFERGYVVIHSNLLREPARSTTKVFPVDADSAEVLIIM
ESKGSQEMKIRVAGNEVVKTNVQYTPGDYTDYYIGGLPQALRERHHITAQPLKGCMKNVK
LNSKYPTFQEKVGIRRGCPKDSLASRKAEFNVGSSLSATLEGFSLANDTTVSLGFKSSEK
EGLLLQNTESSIGAIELALVDGYVVLTFKDEVWKSLKSSKQYQDGKWHYLTATRRVSPQS
IELRIDEDDLGGQITSGSFSSNPDSVFLGKDTFKGCISNLYLRRPASLYRAEDLSQFSST
GDVLLDMCSADRPPQLMLDRNTSRKR
NT seq
6921 nt
NT seq
+upstream
nt +downstream
nt
atgtctggacagtgccagtgtcggaagaacatagtgggccgcacctgcaatgagccagca
cctaactactacttccccagcctgcaccacctgaggtatgaggtggaggatggcatcacc
cctaacgccaggcctgtacgctttggctacgaccccaaggagttcccggaattcagttgg
agaggatacgccatcatgtccccagcacagccagaggtgatcctatcgctagctgtgggt
ttccccggccccttccacatagtgtttcgctacatcaccactacccccctcaggcccaca
cagggttggtggcacagggggcgagtccgagccaggatcttggtggtggacgagtctggt
tttcactcttgctgtgactggtcaggtcagagtaaggaagtggtgtttcctccaagctcc
tcccctgcctacctcacagtccctggcgatggcttcactgagctcttctctctgacccct
gggaaatggatcatacgcatccgggcagagggccttctactggactacttggtgctgctg
ccaagtgattactacgaggctcccgtcctccaggagaagatcactcagccctgcacgtac
acatccaccgccaacagagacgcaaactgtctgttgtataagcatgtggcgatggacagg
ttgagctctgtgctgggctctcagggcctgttctccagccggaggagacgcaggagcaga
caggctcgtgtccaccggcccaccccagaccaccctgacatggcctctctcaccgggaga
caggcccagttacagctgaacctgcgtgtgtctcgccccggtccctacatcctggtcctg
gagtatgccagcgaggtggacatggtccagaatatcaacctcatcatcactggccaatca
gagagccagatccaggccagagccaacatctacagctgccaattcagcttcctgtgtcgg
agtgtggcagtagatggaataaatcgcatggcagtgttccagcttacccataaggccgag
ctccttctccagacctccacagcctcactgctgctgtataaagtgtatgcagtgcctgca
gaggagttctccatggagtatgtgaaccccaaggtgctttgtgtatctatccatggacgc
ttcactgaggacagtcagtactgtgttcccagccagtatgacaggccctcctcagctctg
gttctggacgcagctcgtgatgggcgcctctcctcccaccgggtcgtcccccagcagagg
gagattgaggagtggagacagagacgacagtcaggggcagggggattccctctccctgga
gttcagagtgaaggggtactactaaaatctccccagactgagatcagtttcagtgccaga
gtggaagctcctggcaggtatgtgtttgtggttcactactgccaacctgaacacaccacc
ttccctgtagaggtgcgggtggaggctggacgcacctggactggctttgtaaacgcctcc
ttctgccctggtgtctcttgctgcaggaaggtggtcatcgctgagaggcgcattgctctg
gaccttccccagcaagacgttgccatctctctcaaggttccacccgggaagactctcact
ctggattatatcttggtggttcctgatgatagctacacccctgatttactgaaagagaag
ccactggataagtcatctgatttcgccagacagtgtgaaggtcaaggcttttatatagac
cccagaacctcctcccacttctgccaagtctcgactcgctccctggtagcagcctacagt
gatggggccctgccttgctactgtgataagtcaggagccacggggcccacctgtaaccct
gtagggggccagtgtccttgtcggccccatgtcatcggtcgacagtgtacacgatgcgcc
acaggatactacggcttcccttactgcaaaccctgtgagtgtggccagcagctgtgccac
gaggtgacaggtcagtgtatctgcccgccccagacagtgaagccaacctgtgatgtgtgt
gagagccagacgttcagctaccaccctctagtgggctgtgagggctgtgactgctccccc
agcggagtcaggcccaacgcagggagagactgtgaccgcgacaccggacagtgcatatgt
aagcccaggatcggggggcgccagtgtgaccggtgcgctgcaggtttctacaggttccct
gagtgtctcccatgtagctgtaaccagggaggggtcacaacagacgtctgccaccctgac
acaggacagtgcctctgcaagagaaacgtccagggagcccgctgtgatgcctgtagagac
gggtccttccactttgacccctcccaccccaggggctgcatgagctgcttctgctttgga
gccaacagccagtgtcagagcacccacaaacacagggggaagtttgtggacatgcgtggc
tggcgtctggagagggctgaccaggaggaggtggcatcagtcctcaacccatccagtaac
acagtggtagcagacatacaggagctgcctggcactactcagctcctccactgggtggcg
cctccatcctacctgggagacagggtgtcttcctatgggggctacctgacctaccaggcc
aagtcatttgggattcctagtgaggggatgtctttgctggaccgcagacctgatgtcttg
ctcagtggcaaggagatggccctggtccacatggccccaaagacccccgaaccagacaga
ctccaccagggcagagtccagctagtggaggggaactggcgtcacgccgacaccaaccgg
cctgtgtccagggaggatctgatggtggtcctggctgggctggtggctatgagggtgcag
gctctttacttcacccagagccagagactcagtctgggggaggtaggcctggaggaggct
acagacacgggggccgggggccctgccagcaccgtggagcagtgtgcctgttcccctctc
tacagaggagactcctgccagaaatgtgccactggttactatagagacggcagtgggccc
tacctgggtcgctgtgtgccctgctcctgtaacggcctggccaacgagtgtgacgagagg
actgggaggtgcctgaactgccaatacarcacggctggagacagatgtgagcgctgcaaa
gagggttactatggagatgctgcccagaggtcatgccgggtgtgcccgtgccccttcagt
gtgccggctaacagttttgcagtgggttgcagagaggctgctggagggttccagtgtgtt
tgtaaacaaggctacgcaggagaccggtgtgaacgatgtgcccctggttactacggtgat
ccatcgacagctggaggaagctgcaggccttgtgactgtaacggcaatggaaataactgt
gaccccaggactggggtgtgcaggaacactttggagccaggggacactaacactgatgag
cagtgccaagagtgtgataactgcgccaagaccttaataaatgacctgcagcgtttggat
gaggagctgggcaggattaagactcagctggatagcgccagtatctccgcctcctctcag
gacaggctcaggaagctggaaaatgccatcacagagaccaagtctctggtgaacaagttc
agttccagtgtgaacagtcagaagcccaaggttagccaactagagcaggacactctcagt
gtcaacgaggatatcaacgctctcaaaggcaaggcagatgccagggctgtggatgcccag
agagtcctggaggatgtgggtaagactcatctgagagctaaagacctggatactgaagct
aagaatctgctcaagaagatcctggccctgctacagcagctgaacgagtctggttccagt
ggtggtgtggtgcccagtgagaacctggctaagatgttatctgaggcggaaagcatggtg
aaggagatggagaagaggaacttcaacccacaaaaagacacagctgagaaagagagtgat
gaggcacagaaactgctggactacatcaaggccaatgtgacgaagcagtatgatcagaat
gaggcagcagccaagagggtgaagggtctgctgaaggactatgcagctaaattgaaggac
ctggaggaggcgctgaaacaggctggggacatggtgaagaaagccaactctcagaatgga
ctcaacactgaggcactggaagacatcctgaaacatatggaagatctgaggaaagagcat
aagaaggtccaggaccagatagccatggcagaagatcagttgaaggatacaaaggacctc
cttagaatgttggatgacaggaagacagagtatgaacagctagctgcccaactggacggg
gccaggactgacctcaccaagaaaggcaacgctatgtcccaggccgcggccaaagaggac
attgtggagcgagcagagaaacatgctgagaacctggccaagctggccaaggaactacag
gatgctgtgagggactcgagtggccgctctgatgtgcgtgatgccatggacgccattaag
gcctacaagaacatcacagatgcagtcaacgctgcagagaaggcagccaaggaggccaag
gatgcagctgacaaggccctaaaggatgtgaagaaagaggacctgacaaagagagctaag
aatctgaaagacagcgggaatgacctactgagggaagcaggggatgcagaacaagatctc
aaagaggcctctgatcacctcacagcccagaagaaacacctgaaggacgcagagaagaag
aagaaagcattggagaaggacctcatggacgctcaggcagagctgaacaacatcatgaga
gatgacataggagacatgttggacggggcgaagagcaaggcagcatcagccaatgatacg
gctagcaccaccatggacagactgaatgccatcagagaggaagtggataagatcaacgtc
atgccctccgactccaacctcagcagcgtcatggatgatgtgaacaagtcagtgaagaat
ctgttgaacacaatcccgtctctgcaggataagatctcagaggtggaagagctcagctct
cagctgtcccccgtcaccaacatctcagagaacatcaagaggatcaaggagctgatcgag
cagtctagagacgcagccaacaggattgtggtccctatgaagttcagtggtgagggccat
gtggagatgcgtccccccagggacatggaggacctgaaggcatacactaccctgtccctg
tccttgcagagaccagtgaatcctgacatcggcagaggggatggaacacgcagacgcaga
caggacagcaccaccacagacaagggagacatgttcgtactgtacctcggcaacaaagac
tcatctaaagactacattggcatggccctgaggaagaacgtgctgttctgtgtgtacaag
ctgagcggagaagagtatgagatcaagacagactacatcactaggtctccctctgagcct
gcattctttgacaaggtggacctgcacagaatttatcaagatgcacaggtgatcctcacc
aaactgttcacatctaatgacccagaccctcctcagaccagcagtaagcagggagagctg
accaggaaccttctaaacctgaaccatagtgacgtggtcttctatgtcgggggctatccc
tccaacttcactcctccagcctccctcaactacccaaactataaaggatgcatcgagctg
tccaccttcaacgacagattcatcagtctgtacaactttaagaaggctgtcaagatcaac
ctggagactccatgcaagaggtatatgcagccagtggtgtttgactacttcgaggggact
ggctatgccaaggtgtccacccaaggtgtcatggcgtccaccctcctcctgacccagacc
atctccactcgctcagagaatgggcttctcctctacattggaaatgagtacaactactac
tgtgtgacgtttgagagaggctacgttgtcatccacagtaacctgctcagagaaccagca
cgaagcaccaccaaagtcttcccggtggatgcagattcggcagaagtgttgatcatcatg
gagtctaaaggaagccaagagatgaagatccgtgtagcaggaaatgaggtggtcaagact
aatgtccagtacacccctggagactacacagactactacatcggtggcctaccacaagcc
ctgagagaaagacaccacatcaccgcccagccactgaagggctgcatgaagaacgtcaag
ctcaacagcaagtaccccaccttccaggaaaaagtgggcatccgccggggctgtcccaag
gactccctggcatctcgtaaagcagagttcaacgtgggcagttctctgtcagctactctt
gaaggcttcagcctggccaatgataccacagtctcactgggattcaagagctctgagaaa
gagggtcttctactgcagaacaccgagtcgagcattggtgccatcgaacttgccttggtt
gacggctacgtggttctgacattcaaagacgaagtttggaaatctttgaaatcaagcaag
cagtaccaggatggcaaatggcattacctgactgccaccaggagagtgtctcctcaaagt
atcgagctccggatagatgaggatgatttgggagggcagataacctcaggttccttcagt
tcaaacccagactctgtgttcctggggaaagacaccttcaaaggctgcatctccaacctc
tacctgagaaggcctgcctctctgtacagagcagaggacctgagtcagttcagctctaca
ggagatgtgctgctggatatgtgtagtgctgacagacctccacaactgatgctcgaccgc
aacacctccaggaagagatga
DBGET
integrated database retrieval system