Salvelinus sp. IW2-2015 (Arctic char): 111956624
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Entry
111956624 CDS
T05762
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
salp03015
mRNA surveillance pathway
salp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111956624
09122 Translation
03013 Nucleocytoplasmic transport
111956624
03015 mRNA surveillance pathway
111956624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111956624
03041 Spliceosome [BR:
salp03041
]
111956624
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111956624
Spliceosome [BR:
salp03041
]
Complex C
Other components
EJC/TREX
111956624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
111956624
NCBI-ProteinID:
XP_023832899
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All DBs
Position
LG32:complement(32153508..32170769)
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AA seq
821 aa
AA seq
DB search
MAATEEGGEPKVPSLPQKALRDNQPAESGTPLSQSLAMSLSPQSSFKKFRFLRDPIVLSQ
SSASGVIKRPRTFSESHHPQSLALQSPSKFGEPEQEGTQQGSQPSAGQAAPKKPARQGVL
VSGADTSGTTGPERETPVISTLGKSPEEEKGKSLVSEEHVQAHREETDKQVVGETAREAK
APSGPAGAVLPPSPQPVEGKVEKGRERSQKIEEKLGRRSSSSNDSSDSGSSSSGSSGSSS
SQGKTHTTPSGRRKPFLGIHAGEDNGQKDSEGEEVKTNTTREVNEAAMAEPKKAPESSEE
CETPKAFTARRISLSSSKASPGAVSAEGETESGAGRKRRWGSSTAVTAKKSSMSITTDSL
KSLIPDIRLCPGQEMVVDLHPEEDHLSGVEEEGRERGEQDLKIRRTVTQVVPSVTQENGQ
KESKRSEHEEEDREDGGEVKGDREEKMDGSFQRDSLETQCPSPPSHNMEMKTVTPSDTLI
RRSISQLKSGVSITIDDPVRTAKQPSPPRGKVSNIVHVSNLVRPFTLGQLKELLGRTGTV
LEDGFWIDKIKSHCYVTYSSAEESIATRAALHGVKWPQSNPKFLSLDFIQQEELDFHRGL
PPPERAGEGERGAAAVPGRGAALPPLLPEREQWAEREREMEHRERTRAEREWDRDKVRDF
GPGKPGEEAVPRRSRSRERKRKERKMDKKEKAADEPPVKLLDELFNKTKAAPCIYWLPLT
EEQFAQKETARQERMKRRKEQQEEVEKKREEERKERMKAASVASGERGEGERYRQREGDW
GIDGESGKHREDCYRRPGGSSAGGTRRSRSRSDPPPRDRRR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacagaggagggtggggagcccaaagtgccatccctaccccaaaaagcatta
agagacaaccagccagctgaatctggtacgcccctgtcacaatctctagcaatgtctctg
tcaccccagtcctccttcaagaagttccgtttcttgagagaccccatagttctatcccaa
tcttctgcatccggggtcatcaagaggccccgtacattctctgaaagccaccatcctcag
tccttagctctccagtcccccagcaaatttggggaaccagagcaggaaggtactcagcag
gggtcccagccttctgctggacaagcagcaccaaagaagcctgcaagacagggtgtcctt
gtttctggagcagacacgtcggggacgacagggccagagagggagaccccagtgatttcc
acactgggcaagagtcctgaagaagaaaagggtaagagcctggtgtcagaggagcatgtc
caagcacatagagaggagacagacaaacaggtggtgggagagacggccagagaagcaaaa
gccccctcaggtccagcgggagctgtgctacctccctcaccccaaccagtggaaggcaag
gtagaaaaaggaagggagaggagtcaaaagatagaagaaaagctgggaagacggtcttcc
tcgtcgaatgactcctcagattctgggtcgtcgtcctcaggttcgtctggttcatcatca
tcccagggcaaaacacacaccactcccagtggtagaaggaaaccattccttggaatacat
gctggagaagacaatgggcagaaggacagcgagggagaggaggtaaagacaaacactaca
agggaggtgaatgaggctgccatggctgagcctaagaaggctcctgagagcagtgaggag
tgtgagacaccaaaggcattcacagcccgtaggatctcccttagcagcagcaaggcctct
ccaggtgctgtcagtgcagagggcgaaacagagtctggggccgggaggaagaggcgatgg
ggatccagcactgcagttacagccaagaaatcatccatgagcattaccacagactctctg
aagtctctgatcccagacatcagactgtgtccaggccaggagatggtggtggatttgcac
ccagaggaggatcacctctctggggtggaggaggagggcagggagcggggtgagcaggac
ctcaagatcagacgcacagtcacacaggtggtcccgtcagtgacccaggagaatggacag
aaggagtccaagaggagtgaacatgaggaggaagaccgagaggatggaggggaggttaaa
ggagacagagaggagaagatggatggctcattccagagagactcattggagacacaatgc
ccctctccccccagccataacatggagatgaaaacagtgacccccagtgacacattgatc
cgtcgctccatcagccagctgaagtctggcgtgtccatcaccatagatgaccctgtccgc
acggccaagcagccctctcctccacgaggcaaagtgtccaacatcgtccacgtgtccaac
ctggttcgtccgttcaccctgggccagctgaaggagctgctcggtaggaccggcaccgtg
ctcgaggacggtttctggatcgacaagatcaaatctcactgctacgtcacatactccagt
gcagaggagtcaattgccactcgtgcagccctgcatggggtgaaatggcctcagagcaac
cccaagttcctcagtttggacttcattcagcaggaggagctggatttccacagaggcctg
cctccccctgagagggctggggagggtgagcggggggctgcggcggtgcctggtcggggg
gcggccctgccccctctcctgcccgaacgggaacagtgggcggagcgagaacgtgagatg
gagcacagggagaggacccgggctgagagggagtgggacagggacaaggtccgggacttt
ggtccaggaaaacctggagaggaagctgtccccagacgatcccgctccagagagaggaaa
cgcaaggagaggaagatggacaagaaagagaaagctgcagacgaacctcctgtcaaactg
ctggatgaactgttcaataaaaccaaagcagccccttgtatatactggctccccctcaca
gaagagcagtttgcacagaaggagacagctcgacaagagcggatgaagaggaggaaggag
cagcaagaggaggtggagaagaaaagggaggaagagcgcaaagaaaggatgaaagccgcg
agtgtcgcatctggagaaagaggcgagggggagcggtacagacagcgagagggagactgg
ggcatagatggagagagtggcaaacacagagaagactgctaccgcagacctgggggcagc
agtgcaggggggaccagacgctcacgcagccgcagtgaccccccacctcgtgacagacga
cgctag
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