Salvelinus sp. IW2-2015 (Arctic char): 111956630
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Entry
111956630 CDS
T05762
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111956630
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GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
111956630
NCBI-ProteinID:
XP_023832913
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Position
LG32:complement(31557357..31564511)
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AA seq
699 aa
AA seq
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MVLESSKWVMFIVCWLFKNVSCNSVAQKIYVELNNTVPCVRLLNATHQIGCQSSISGDTG
VIHVLESEADLEWPLSKGPNPPYMVLLESSLFTKSIMMKMKNASSRVAGVVVVPKTSLPE
FSPHTTCPNENTGVYTETYDHNLAHCNTTVWNPRGNGLSYEEFDFPVFSLKEDNETEIIK
QCYFDHNRVVNGSGLQYPLCAMQLFSHMYAVTDTATCMRRSSIDFSSLPVKVCEPLGGYN
VLAFIRPYNSTAFGHKENESVVIAAARLDSRAFFLQDSAGAEGSVSGFVTLLAAAQALRE
ATQEAPPTRNILFAFFNGEVFDYIGSSRMVYDMKNNKFVIDLDNVHSILEIGQVAVRSGT
NLFLHSDPVSRRNNTVHDEVTNLVKNLQSSTAGLNFSFVETGFSQPLPPSSFQRFLRARA
IPGIVLADHQTAFNNRYYESFYDNAAHLNLTYPSNLSPEEQLEFVTDTAKSLTEVATAVA
RALFKQAGGNNSQVNNINADPKTVTQMLYGFLVRSNNSWFQAVMAPELKDVLQPNPPWYY
VGVAKLSHQANALTYLVQYLLANLTGTATNLTQSQCKKPDELPNESTYMYSYFWVQGVVP
PNSTQRESFCVRTAVRLAKAVSPAFVLGDYVSKEYSTWTESQWKFIKARIFLVASRDLEM
LTLGVGVAVLFTSLLVTYFVSTKADVLFSVVREPNNATY
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggttttggaatcatcgaaatgggttatgttcatagtttgttggcttttcaaaaatgtg
agttgtaactctgttgcgcagaagatttatgttgaactgaataacactgtaccatgcgtc
cgactgctcaatgctacacatcagattggctgccagtcctcgatatcaggtgatacaggg
gtgatccatgtcttggagtctgaggcagatctggaatggcctttgagcaaaggacccaat
cctccttatatggtcttgttggagtcatccctcttcaccaagtccatcatgatgaagatg
aagaatgcctccagcagggtggcaggggttgtggtggtcccaaagactagcctaccagag
ttctcgccacatacgacatgtcccaatgagaacacgggtgtttacacggaaacctatgat
cataatttagcgcactgtaacacgactgtatggaatcctcgggggaacggtctatcctat
gaggaatttgacttccctgtcttctccctgaaagaagacaatgaaacagagatcatcaaa
cagtgctactttgatcataatcgtgtggtgaacggcagtggcctgcagtatcctctgtgt
gccatgcaactcttctctcatatgtatgctgtcactgacactgcaacctgcatgagacgc
agcagcatcgacttcagcagcttgccagtgaaggtgtgtgaacctcttggtggttataat
gtgttggctttcatccggccttataacagcaccgcctttggtcacaaggagaacgagagt
gttgttatagcagcagccaggctggacagcagggcatttttcttgcaggattctgcagga
gcggaggggagtgtctcagggtttgtcactctgctggctgctgcccaggcactacgtgaa
gccactcaggaagcccctcccacacggaatatcctctttgccttcttcaatggggaagta
tttgactacattggcagctctcgaatggtttatgacatgaagaataacaagtttgtgata
gacctggacaatgttcactcaatactggagattggacaggtagcagtgcgcagtggcacc
aacctatttcttcactcagaccctgtgtccaggaggaacaacactgtccatgacgaggtt
acgaatcttgtaaaaaacttacagtcctccacggctggtctcaacttctcatttgttgag
acaggtttttctcagccactcccgccctcctcctttcagcgtttcctccgagctcgggca
attccagggattgttcttgcagaccatcaaacagctttcaacaataggtactatgagagt
ttttatgacaacgctgcccacctgaacctgacttatccatctaacttgagtccagaggaa
cagctagagtttgtgactgatactgcaaagtctcttaccgaggtggctactgcagttgcc
cgcgctctcttcaagcaggctgggggaaacaactcccaagtcaacaacatcaatgcagac
cccaaaacagtgacccagatgctgtatgggtttctggttagatccaacaacagctggttt
caggcagtgatggccccagaactgaaggacgttctccagcccaacccaccctggtactac
gttggtgttgccaagttgtcccatcaggctaacgcactgacctatctggtccaatatctc
ctggccaatttaacgggaacagccaccaacctcacccagagccagtgcaagaagccagat
gagctgccgaacgagagcacatatatgtactcttatttctgggttcagggcgtggtccca
cccaacagcacccagagggagtctttctgcgtacgcacagcagtacgcctggccaaggca
gtgtcccccgccttcgtgctgggggattacgtttccaaagaatattccacatggacagaa
tcgcagtggaagttcatcaaagctcgaattttcctagtagccagccgggacctggagatg
ctgaccttaggcgtgggagtggctgtgttgttcacatcgctactggtgacatactttgtc
agtaccaaggcagatgtcctcttcagcgtcgtcagggaacccaacaacgccacatactaa
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