Salvelinus sp. IW2-2015 (Arctic char): 111956724
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Entry
111956724 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111956724
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111956724
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111956724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Sina_RING
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111956724
NCBI-ProteinID:
XP_023833041
LinkDB
All DBs
Position
LG32:29924108..30009857
Genome browser
AA seq
1049 aa
AA seq
DB search
MTTGRNNRVMMEGVGARVIRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRIFDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECNNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFTGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGEGVAAGAEGGSSQFLVGDLVQICYDIDRIKLLQRGHGEWA
EAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKVAPTGSAVTNASGERLSQLL
KKLFETQESGDVNEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQAASQNGHVDV
LKLLLKHNVDLEAEDKDGDRAVHHASFGDEGSVIEVLQRGGADLNARNKRRQTPLHIAVN
KGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNA
LHHAALRGNPSAMRVLLAKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSASL
DIQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQ
DMQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTMRNKKGQSPLDLC
PDPSLCKALAKCHKEKISGQVGSRSPSLNSNGETLEECMVCSDMKRDTLFGPCGHIATCS
LCSPRVKKCLICKDQVQSRTKIEECVVCSDKKAAVLFEPCGHMCACENCAGLMKKCVQCR
AVVERRTPFVLCCGGKGMEGDAADDDDDDDDDDDDDEDLTGNSNSALMAGGSLDLLQPNN
LALSWSSGNIPAMQRDKDNTNVNADVQKLQQQLQDIKEQVSVVTMCPVCLDRLKNMIFIC
GHGTCQLCGDRMSECPICRKAIERRILLY
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgactaccggcaggaataaccgtgtgatgatggaaggagttggtgcaagagtgatccgc
ggacccgattggaaatggggaaaacaggatggtggagagggacatgtaggcaccgtcagg
agttttgaaagtccggaagaagtggttgttgtctgggataacgggactgcagccaactac
cggtgctctggtgcatacgacgtgaggatatttgatagtgctcccacaggtatcaagcat
gacggcaccatgtgcgacacctgtcgtcagcagcctatcatcgggatccgctggaagtgt
gctgaatgcaacaactatgacctctgcaccacctgttaccatggagacaagcaccacctg
cgacatcgcttctacaggatcactacccctggtagcgagagagtcttgttggagtctcgc
cgtaagtcgaagaagatcacagcccgaggcatcttcaccggtggccgggtggtgagagga
gtggactggcagtgggaggatcaggatggaggcaacggaaggagaggaaaggtgacagag
atccaggactggagtgcagccagcccccacagtgcagcctacgtcctctgggacaatggg
gccaagaacctctacagagtgggcttcgaggggatgtcggatttgaaatgtgtccaggat
gccaaaggaggctctttttacagagaccactgccctgttctaggtgagcagaatggcaac
agaaacccaggcggtttgcagatcggagacctggtcaacatcgacctggacctggaaata
gtccagtccctgcagcacggccacggaggctggacagacggtatgttcgagactctcacc
accaccggtaccgtgtgtggcatcgacgaggaccacgacattgtggtgcagtaccccagt
gggaacaggtggacgttcaaccctgcggtgctgaccaaggccaacgtggtgcgtagtggg
gaaggtgttgcggcgggggcagagggaggcagctcccagttcctggtgggagacctggtc
cagatctgctacgacatcgaccgcatcaagctgctgcagagaggccatggggagtgggct
gaggccatgctgccaaccctgggcaaggtgggccgcgtgcagcagatctactctgacagc
gacctgaaggtggaggtatgtggaacgtcatggacctataaccctgctgccgtcaccaag
gtggcccccactggctctgctgtcaccaacgcctccggagagcgtttgtctcagctgctg
aagaagctgtttgagacccaggagtcgggtgatgtcaatgaggaactggtcaaagcagca
gccaatggagacctggccaaggtggaggacatcctcaagagacctgacgtggacgtgaac
gggcagtgtgctggacacacagccatgcaggcggccagtcagaacggtcacgtggacgtc
ctcaagctgctgctgaaacacaatgtggacctggaggctgaggacaaggatggagaccgg
gcggtgcaccatgcgtccttcggagacgagggctctgtgatcgaggtgctgcagaggggc
ggtgccgacctgaacgccaggaacaagcgcagacagacccccctgcacattgctgtcaac
aaaggccatctgcaggtggtcaagaccctgctggactttggctgccaccccagcctccag
gactccgagggagacacycccctgcatgacgccatcagtaagaagagggacgacatgctc
tctgtgctgctggaggcgggagctgacgtcaccatcaccaacaacaacggattcaacgcc
ctgcaccacgccgccctgcgagggaaccccagtgccatgcgtgtgttgctggccaagctg
ccgcggccctggatcgtagatgagaagaaagatgacggttacaccgccctgcacctggcg
gcgctcaacaaccacgtagaggtggccgagctgctggttcaccagggcagtgccagcctg
gacatccagaacgtcaaccagcagacagcgctgcacctggctgtggagagacagcacaca
cagatagtcaggctgctggtgcgagcagaggcaaagctggacgtgcaggacaaggatggg
gacactcctctccacgaggcgctgcgtcaccacacgctgtcccagctccgccagctgcag
gacatgcaagacgtcagcaaggtggagccctgggaaccctccaaaaacacgctgatcatg
ggcctgggcacccagggagcagagaagaagagtgcagcgtccatcgcctgcttcctggca
gctaacggagcagacctgaccatgcgcaacaagaagggccagtcccctctggacctctgc
cctgaccccagtctttgtaaggccctggccaagtgccacaaggagaagatcagtggccag
gtgggctctcgcagcccgtctctgaacagtaacggtgagaccctggaggagtgtatggtg
tgttctgacatgaagagagacaccctgttcggaccatgcggacacatcgccacctgctct
ctctgctccccccgcgtcaagaagtgtctcatctgcaaggaccaggtccagtccagaacc
aagatcgaggagtgtgtcgtatgttctgacaagaaggctgccgtgctcttcgagccctgc
ggtcacatgtgcgcttgtgaaaactgtgccggcctcatgaaaaagtgcgtacagtgccgg
gctgttgtggaacgccgcacgccctttgtcctttgttgtggagggaaaggtatggagggt
gatgccgctgatgatgatgatgatgatgatgatgatgatgatgatgatgaggaccttaca
ggtaactctaactcagctctaatggcagggggctcgctggatctactkcagcccaacaat
ctggcactaagttggtccagcggtaacatcccggccatgcagagagacaaagacaacacc
aatgtcaacgctgacgttcagaaactgcagcagcaactgcaggacatcaaggagcaggta
agcgtggtgaccatgtgtccggtgtgcctggaccggctgaagaacatgatcttcatatgt
ggccacggcacctgccagctgtgtggcgaccgcatgagcgagtgccccatctgccgcaag
gccatcgagagacgcatccttctgtactag
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