Salvelinus sp. IW2-2015 (Arctic char): 111956868
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Entry
111956868 CDS
T05762
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
salp01009
]
111956868 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111956868 (rpap2)
Enzymes [BR:
salp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111956868 (rpap2)
Protein phosphatases and associated proteins [BR:
salp01009
]
HAD phosphatases
Fcp/Scp phosphatases
111956868 (rpap2)
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111956868 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
111956868
NCBI-ProteinID:
XP_023833319
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All DBs
Position
LG32:9566253..9588230
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AA seq
672 aa
AA seq
DB search
EPRKRVARSSKPGKRDGKSVKEAQAAAEEARRREAVRETLREKLDLEKRALQVVERLLED
SVADDFLVDCARLITAANYKDTVEERSIVKLCGYPVCSNKLGKVSTQQFKISTKTNKVYD
ITERKSFCSNFCYKASKSFELQISKSPLWLRQHESPPDVKLMKKGDGGSTGEEVRLAERR
LREDDVENPIPLDSVSPEAPEDPRRSPTAGHSDDSDTEHDFVSSVVSQRRGPRVHWGDLP
KRTAEGQGREPGEGEDKERRSGGKDTTVPNQIQTNEAEDEEENTEESQKAQRKPSNGTDG
HQQHTTDTNHQSEQQSFLGERGSPEGQSMEEAAELLSQVTIQDRDPATATSPALTACSVQ
NQDPALNRSPQGDPAQPTQPGINITQVGMSRRGAQGLRGLLKCHEAGTKPVSVRLNLLEG
LRRTFTEWMTEETMKFLYGPDHFSKTLIETKEEEEKEEELDEDDLEDIVKDGGEERETDS
QGGPGRPSAPAPDYDTLRRETEEMGLRVREFYKGTKEVQRVSGKQHARDEDSENQGGALP
LVDSHSQHLIQKRITVEKLTKGLRDIVGPLRLTMTDVSSDLNRLVRTFRFTNTNIIHKGP
EWTLIAVVLLHLLSEVSPVVREALERPASVDYLSTLMQELPLLDQDLQSLIQLLRTAELC
PHEHTENRQTNQ
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gagccacgaaaaagagtcgctcgctcttcaaaaccaggcaaaagggatgggaagagtgtc
aaagaagcacaggccgcagcagaggaagcaagaaggagagaggcagtgagggagaccctg
agagagaagctggatctggagaagagggctctgcaggtggtggagcgtctcttggaggac
agcgtcgcagacgacttcctggttgactgtgcaaggttgatcactgctgccaattacaaa
gacacagttgaggagaggtccattgtgaagctgtgcggttatcctgtctgttcaaacaaa
ctgggcaaggtctccactcaacagttcaaaatttccaccaaaaccaacaaagtctatgac
atcacggaacgcaagagcttctgcagtaacttctgctacaaagcctccaagtcctttgag
ctgcagatatcaaagagccctctgtggctgaggcagcacgagagcccccccgatgtgaaa
ttaatgaagaaaggagatggcggtagcaccggagaggaggtgaggctggctgagaggcgt
ctcagagaggacgatgtggagaaccccattcccttggactccgtgtccccagaggcccca
gaggaccccaggcgctcccctacagccggccacagcgacgacagcgacacagaacacgac
tttgtctcaagcgtggtctcccagcgacggggacccagggtgcactggggcgatctgccc
aagcgcaccgccgaagggcagggtagggaacctggagagggggaggacaaggagagaagg
tcgggagggaaggacacaacggtgcccaaccaaatacaaacaaacgaggcggaagacgag
gaggagaatacagaagaatcacagaaagcacaaaggaagccaagcaatggcacagatgga
caccaacagcacaccacagatacgaaccaccagagtgagcagcaatctttcctgggagag
agaggctcgccagagggccagtctatggaggaagccgcagagctattgagccaagttaca
atacaggatcgagacccagccacagctacgtctcctgcactaacagcctgcagtgtacag
aatcaagacccagctctaaaccgcagtccacagggagacccagcacagcccacccagcct
ggcatcaacatcacccaggtgggcatgagcagaaggggagcccaggggctccgggggctc
ctcaagtgccacgaagccgggactaaacctgtctcggtccggctgaaccttctagaaggc
ctaaggaggaccttcactgaatggatgactgaggagactatgaagttcctatatggccca
gaccactttagtaaaacactgatagaaacaaaggaggaggaggagaaggaagaggagcta
gatgaagatgacttggaggacattgtgaaggatggtggggaggaacgtgagactgactcc
caagggggtccaggaaggccctcggccccggccccagactacgacaccctacgcagggag
acagaggagatggggttgagggtgagggagttctacaaagggacgaaggaagtccagcgg
gtgtcagggaaacaacatgccagagacgaagactcagagaaccagggtggggcactcccg
ttggttgactcccattcccagcacctcatccagaaacggattacggtggagaagctcact
aaaggcctgagagacatcgtgggccctctgcgtctcaccatgactgacgtctccagtgac
ctcaacaggctggtcagaaccttcagatttacaaacaccaacatcatccacaaaggccca
gagtggaccttgattgcggtggtgctcctccatttgttatcagaggtgtccccggtggtg
cgggaggccctggagaggccggcctccgtcgattacctctctactctgatgcaggagctc
ccactgctggaccaggacctgcagagcctgatccagctactcagaaccgcagagctctgt
ccacacgagcacacagagaaccggcagacaaatcaatga
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