Salvelinus sp. IW2-2015 (Arctic char): 111956950
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Entry
111956950 CDS
T05762
Name
(RefSeq) vesicle-trafficking protein SEC22b-B-like
KO
K08517
vesicle transport protein SEC22
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04130
SNARE interactions in vesicular transport
salp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111956950
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111956950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111956950
Membrane trafficking [BR:
salp04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
111956950
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Sec20
Motif
Other DBs
NCBI-GeneID:
111956950
NCBI-ProteinID:
XP_023833431
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Position
LG32:8835598..8840041
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AA seq
215 aa
AA seq
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MILLTMIARVADGLPLAASMQEDEQSGRDLQHYQSQAKQLCRKLNAQSPNRCTLEAGVMS
FHYVIEHGVCYLALCEAVFPKKLVFGYLEDLQTEFNEQHGKKVTTVSRPYSFIEFDVYIQ
KTKRNYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDTKASDLSSLSKKY
RSDAKYLNTRSIYAKIAAGAVFFITLIVYMRFWWI
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgattttactgacaatgatcgcccgagtagcagatggtctgccgcttgctgcatcgatg
caagaagacgagcagtcaggaagagacttgcaacactaccagagccaggctaagcagctg
tgccgcaaactaaatgcccagagtcccaatagatgtactctggaggctggggtcatgtcc
ttccactatgtaatagaacatggcgtgtgctacttggccttgtgtgaagctgtgtttccc
aagaaactggtctttgggtacctggaagacctccagacagaattcaatgaacagcatgga
aagaaagtcaccacagtttccaggccgtactctttcattgagtttgacgtgtacatccag
aagacaaagaggaactacattgacagcagggcgcggaggaacctgggcagcatcaacaca
gaactgcaggacgtccagcgtatcatggtggcaaacattgaagaggtcctgcaacgagga
gaggccttatctgctctcgacaccaaagccagcgatctgtccagcctttcaaagaagtac
cgcagcgatgccaagtacctcaacacccgatccatctatgccaagatagcagccggggca
gtcttcttcattacactcatcgtctatatgcgtttctggtggatctga
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