Salvelinus sp. IW2-2015 (Arctic char): 111956959
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Entry
111956959 CDS
T05762
Symbol
aire
Name
(RefSeq) autoimmune regulator
KO
K10603
autoimmune regulator
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111956959 (aire)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111956959 (aire)
04121 Ubiquitin system [BR:
salp04121
]
111956959 (aire)
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
111956959 (aire)
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111956959 (aire)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSR
PHD
SAND
PHD-1st_NSD
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
111956959
NCBI-ProteinID:
XP_023833440
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All DBs
Position
LG32:complement(9159755..9172555)
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AA seq
526 aa
AA seq
DB search
MSRVEAFEDPDPRSQLKEFRTDISMVIDDPFPLLYGLVDRSIISDQILKETLEREGREGI
HKAMYSLLSRLLEQSRTTIQAFWTNLAKDYNQHSYPRLQALLTSIQPGREMVGSKQGKRS
PRGSRESHSRKRSLGERHPHHPHHSQHHDIVPDTHYNALCSHMTTSCTTIYSKLKCFLTK
LIIHVFGVIVPGGKVKSVKKSEGAAVVSQIPAGKGVQAVSTSVQRAVTLSSSELPVSCGA
REEILIKQVFGSGSAKKCIKVGGEYYTSGPLDELTGGLKTKSVNTKYHHKEESSTRVRDA
QRNDDECAVCKDGGELICCDGCPRAYHLTCLDPPLTTIPSGTWRCQSCHSNKVRRERIYP
VLPSQLTETSSSNSTIDFSFFSSLSSTSHSSVTTTKSGQVCAYQCAGGEVVEVRETCGVC
LLSGGDLTLCLQCLQKYHTYCHFPNGRSICSSCSRPWGSSTDREAESKGLQVGLTPHTQE
HSSLSEPILHKDELDSIMGEGSIDGILQWAFHNISRPLSDTQGYFQ
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagtggaggcttttgaggatcccgacccccgttcccagctcaaggaattccgc
acggacatctccatggtgattgatgatcccttcccactgctctatgggttggtggaccgc
agcatcatcagcgaccaaattctgaaggagaccctggagagggagggcagagaggggatc
cacaaggccatgtactccctgctttccaggctcctggagcagagtaggaccaccatccag
gccttctggaccaacctggccaaggactacaaccagcacagctaccccagactgcaggcc
ctcctgaccagcattcaaccaggtagggagatggtgggctccaagcaggggaagagatcc
ccacgagggtctcgagagtcccacagcaggaagaggagcctgggggagagacaccctcat
caccctcaccactctcagcaccacgatattgtaccagatacccattataatgcactctgt
agccatatgacaactagttgtactacaatatactcaaaactcaagtgtttcttaaccaag
ctcattatacatgttttcggtgttattgttccaggtggcaaagtgaagtcagtgaagaaa
agtgaaggtgctgcagtggtctctcagatacctgctggaaagggtgtccaggcggtgtcc
acctcggtccagagggcagtcactctgtcgtccagtgagctgccggtcagctgtggggcc
agagaggagatcctcatcaaacaggtgtttggatctggaagtgccaaaaagtgcattaaa
gtgggtggtgagtattacacctctgggccattggatgagctgactggaggcctcaagaca
aagtctgtaaatactaaataccaccacaaggaggagtccagcaccagggttagagacgcc
cagcgtaatgatgatgagtgtgcagtgtgtaaagatggaggtgagctcatctgttgtgat
ggctgtcccagggcctaccacctgacctgcctagaccctcccctcaccacaataccaagt
ggtacctggcgctgtcagtcatgtcatagcaataaggtgagaagagagagaatctaccca
gtactacctagccagttgacagagaccagctccagtaactccaccatagacttctccttc
ttctcttccttatcctccacctctcactccagcgtcaccacaaccaagagcggtcaggtc
tgtgcatatcagtgtgcaggtggcgaggtggtggaggtcagggagacgtgtggggtttgc
ctcctcagtggaggagacctgaccctctgtctccagtgcctacagaagtaccacacctac
tgccacttcccaaatgggaggtccatctgctcctcctgcagtaggccctggggcagctca
acagacagagaggcggaatccaagggcttacaggttggtctgactccacacactcaggag
cactcgtctctctcagagcccatcctacacaaggatgaactagactccatcatgggagag
ggctccatcgacgggatcctgcagtgggctttccataacatctccaggcctctctcggac
actcagggctacttccaatga
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