Salvelinus sp. IW2-2015 (Arctic char): 111957049
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Entry
111957049 CDS
T05762
Name
(RefSeq) transcription factor HES-1-A-like
KO
K06054
hairy and enhancer of split 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03460
Fanconi anemia pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111957049
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111957049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111957049
03400 DNA repair and recombination proteins [BR:
salp03400
]
111957049
Transcription factors [BR:
salp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
111957049
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
111957049
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
GMIP-like_FCH
Motif
Other DBs
NCBI-GeneID:
111957049
NCBI-ProteinID:
XP_023833536
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Position
LG32:complement(8990764..8992579)
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AA seq
267 aa
AA seq
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MPADILEKTSPSSVXATPSRVSGTPDKPRTASEHRKSSKPIMEKRRRARINDSLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRLQMAAAISRDPSVFGKYRAGFSECMSE
VTRFLSTCGGVNTEIRSRLLSHLAGCVSQINTVNFSTQCQIPTYPPHPAHPLLAQAIAQI
PSASPQLNGIMPCKSGSPINLTSEMAKLYSGLQIVPAATDGQFAILIPSVALTHMSAPNA
IHGNPALAVPVSPVAPPVTADSVWRPW
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgatattttggagaaaacatccccatcctctgtcgyagccaccccgtcgagg
gtcagtggaactccggataaaccaaggactgcctcagagcacagaaagtcctcaaagcca
attatggagaagagaagacgtgcgcgaatcaatgacagccttggtcagctaaagaccctc
atcttggatgcgttaaaaaaagatagctcgagacattcgaagctcgagaaggcggacatc
cttgagatgactgtgaagcaccttaggaatatgcagcgtctccaaatggctgcagctata
agcagggatccatcagtctttggcaagtacagagcgggattcagcgaatgcatgagtgaa
gtcacccgttttctgtccacgtgtggaggggtgaacacggagatcaggtctcgacttctc
agccacttagccggctgtgtgtcacagataaacaccgtaaacttctcaactcaatgccag
atccccacctaccctccgcatccagcgcatccattgcttgcccaagccattgcgcaaatc
ccaagtgcatctcctcagttaaatggaataatgccttgcaaaagtggctcgcctatcaac
ctcacatcagaaatggctaaattatacagtggacttcagattgtgccggcggcgacagat
ggacaattcgccattctgattccaagcgtggctcttacgcatatgagcgcgccaaacgcg
atacatggcaatccagcacttgcggtgcctgtgtcacctgttgcgcctcccgtcaccgca
gactccgtgtggaggccatggtag
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