Salvelinus sp. IW2-2015 (Arctic char): 111957105
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Entry
111957105 CDS
T05762
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111957105
Enzymes [BR:
salp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111957105
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Meiosis-specific proteins
Others
111957105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
SNRNP200_wHTH
ResIII
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
111957105
NCBI-ProteinID:
XP_023833605
LinkDB
All DBs
Position
LG32:9532890..9562922
Genome browser
AA seq
1571 aa
AA seq
DB search
MLDSEDCTLSLDNLFFERPVVHKVKPLCQEQSSWQLEPPLSLSQIPATQDIQKEAEVLSS
FSFSQKSNKFLPPLKRAVDGDGFTPKNNKLNQNTSDGRKEPEAQGGCALWAREDFMNKSQ
DTTKVRGRTKTPQESGHALEQKHFPLEFSQSPPLRRSLFKPPSGQVLNSSANSNRGLNQA
RPGVQQTFDHVSMATEPRLAKQSAAGPGSLTGLCPPTARGPPQKTQDKGTKRAHVLPMTP
QPLHIQSTSGPGILRPISEIPAKFRSVFKEFPYFNYVQSNALDDVLYTGKNFVACAPTGS
GKTVLFELAIIRLLMETTEPWRNVKAVYMAPIKALCSQRFEDWKKKFGPLGLSCKELTGD
TEIDDFFEIQDAHIIMTTPEKWDSMTRKWRDNCLLQLVRLFLIDEVHVVKDPMRGATLEV
VVSRMKAVHAYRAAENPQEDLSMRFVAVSATIPNTKDIADWLCDDRDPATCLEMDESHRP
VKLRKVVLGFPCSSNQTEFKFDLSLNYKMANIIQTYSDQKPTLVFCSTRKGVQQSATVLA
KDARFIMSIEHKQRLVNYANSLLDSKLRDLVLFGVGFHHAGVDVSDRKRIEEAFNMGDLP
VLFTTSTLAMGVNLPAHLVVIKSTMHYIGGVCEEYSEADMLQMIGRAGRPQFDTSATAVI
MTKTQTKDKYMQFMNGAEIIESSLHTHLVEHLNAEIVLHTISDVNMALDWIRSSFLYIRA
LKNPRHYGFSTDLDRCGIEAKLQELCLKNLHSLASIGLISMDEDVNIKATEAGRLMARYC
VAFDTMKQFSKVTGTETLPELIELMVKGREFTDVQLRVNEKRTLNTLNKDKNRITIRYPM
EGKIKNKEMKVNCLIQAQFGSIPIQEFGLAQDTGRIFRNGVRISRCLAEFLNQRSKTGFS
ALLNSLILAKCFRAKLWEDSPYISKQLEKIGLSLSTAMVNAGLTTFNKIEQTNARELELI
VNRHPPFGNQIRDAVINLPKYEVSLEQLPRYNIATAEIAVTVNVKNHEQLLSKRTTHDHH
YVTMIIGDCDNNVVFLQKLTDLMLLKSGNWSKKIEVAKAFKGEEISVNLISSEYVGLDIQ
QKFSAFYSGPKRYGGESLTPEQHDTMQIAQANAQRSQGATQRIQPTGQQTQATAQKRTST
STEKVPGKRQCNHFCKNKDQCGHDCCQNGVPVVLRRPMNQHSSFSSYLQDLKTRSDTLTE
TPVKRLKMRMSGGTGATNIHQFSYTPAACRYVGNHYGASAIQQSVESAEDFATPQEMAYL
ENYDHEYNDYLEDIYQTMGEEEPPPIQTPTESQSTSMWRKPSAYNGGSLSHSTPQSQGMG
YSQSHSTTQSQSTGYPQSHSTHQTHSMGYPQSHFPLQNQSREETQSHNTPQSQTSGYSTP
QSQSRSYSPSPIVDLTDDSGFLSSSHTPSVTFDLGDEWDDFDDDNLVHASETSCTTVAKT
QGMDRDRLKGHSTPLPSTYVQPKPRFTVSSAPLRSTSPVVPQIAVTSLSVRPHNLQASAP
WSHSDNKATRTFSAPSFPKQTDTRMAPLGGQFDFFSKTTTQKXYNATDKRLQGEDNSKEV
EAFMGIFDGLF
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgttggactcagaagactgcactttgtccctggataacctgttctttgagaggccagtt
gtccacaaagtaaagccactttgtcaagagcagagttcttggcagttggaaccccctctg
tccctctcccagatcccagccactcaggacatccagaaagaggcagaggttctttcatca
ttcagtttctctcagaagtccaacaaattccttccccctttgaaaagagcagttgacggt
gatggtttcactcccaagaataacaaattaaatcagaataccagtgatggaagaaaagaa
cctgaggcacagggcgggtgtgccctttgggctcgggaagacttcatgaataaatcccag
gataccacaaaggttagaggtcgaactaaaaccccacaggagtctggtcatgcactggag
cagaaacatttccctctggagttcagccaaagcccacctctacggagaagtttgttcaaa
cctcccagtggtcaggtgttgaacagcagcgcaaactcaaacagaggcctcaaccaggca
agacccggagtgcagcaaaccttcgaccatgtttctatggcgacagagcctcggctggca
aagcagtcggcagcaggccccggctccctcaccggtctgtgcccgcctacagcccgggga
ccaccacagaagacacaggacaagggcaccaagagggctcatgttctccccatgacaccc
caaccccttcacatacaaagtacttctgggcctgggatactccgaccaatctctgaaatc
cctgctaaatttagatcggtcttcaaagagttcccttacttcaactacgttcaatcaaat
gccctagatgacgttctatacacaggtaagaactttgtggcttgtgctcctacgggctct
ggtaagactgtgctttttgagttggccatcatccgcctactgatggagaccacagagccc
tggagaaacgtcaaagctgtgtacatggcccccatcaaagctctatgcagccagcgcttt
gaggactggaagaagaaattcgggcctctgggcctgagctgcaaggagctgaccggagac
acagagatcgacgacttctttgagattcaggacgcccatatcatcatgaccacacctgaa
aaatgggacagcatgacgaggaagtggagggataactgcctgctgcagttggtccggctt
ttccttattgacgaggtgcacgtggtgaaggaccctatgcgtggagctacactagaggtg
gtggtgagcaggatgaaggcggtccatgcctaccgtgcagcagagaaccctcaggaggac
ctctccatgagatttgtggccgtctctgccaccatccccaataccaaggatatagcagac
tggctgtgtgacgacagagaccctgctacttgtctggagatggatgagagtcacagaccg
gtgaaactgaggaaagtagtgctgggtttcccctgcagcagcaaccagactgagttcaag
ttcgacctgtcactcaactacaagatggccaacatcatccagacctactcggaccagaaa
ccaacacttgttttttgttcaacaaggaaaggagtccagcagtcggccactgttctggcc
aaggatgccaggttcatcatgagtattgagcacaaacaaaggttggtgaattatgcaaac
tctctcctggactcaaaactcagagacttggtgttgtttggggttggtttccaccacgcc
ggagttgacgtgtcagacaggaagcggatcgaggaggccttcaacatgggagacctgcct
gtgctgtttacaactagtactctggcgatgggggtgaacctgccagcccacctggtggta
atcaagtccaccatgcactacatcgggggcgtctgtgaggagtacagcgaggccgacatg
ctgcagatgattggccgagcaggccggccacagtttgatacatcagcgaccgcagtgatc
atgaccaagactcaaaccaaagacaagtacatgcagttcatgaatggagcggaaatcatc
gaaagcagcctgcatacccacctggtggagcacctgaacgctgagattgtcctccacacc
atctcagacgtcaacatggccctggactggatccgctccagcttcctctacatccgagct
ctgaagaaccccagacactatggcttttccactgacttggaccggtgtggaatcgaagcc
aaattgcaagagctctgtctgaagaacttgcattccctggcctccattggtctgatctcc
atggatgaggatgttaacatcaaagctacagaggcaggcaggctgatggcaaggtactgt
gttgcgtttgacaccatgaagcagttcagcaaggtgactggcactgagaccttacctgag
ctgatagaattgatggtgaagggcagagagttcactgacgtgcagctgagagtgaacgag
aagagaaccctgaacactttgaacaaggacaagaacaggatcactatcaggtatcccatg
gagggaaagatcaaaaacaaagagatgaaggtgaactgtttgattcaagcccagtttggc
tctattccaatccaagagtttggacttgcacaggacacagggagaatcttcagaaatgga
gtccgaatcagcaggtgcttggcagagttcctaaaccagcgctccaagacaggcttctct
gctctactcaactccctgatactggccaaatgcttcagggccaagctgtgggaggactct
ccttacatctcaaagcagctggagaaaatagggttgtctctgtcgacggccatggtgaat
gctgggctcaccaccttcaacaagatagagcagaccaacgccagggaactggagctgatt
gtcaacagacatcctccgtttggaaaccaaatcagagacgctgtcatcaatttacccaag
tatgaagttagtttggagcagcttccaagatacaacatcgccactgcagagattgccgtg
accgtgaatgtgaaaaaccacgaacagctactgtcaaagagaaccactcatgaccaccac
tatgtcacaatgatcatcggggactgtgacaacaacgtggtcttcctgcaaaaactcaca
gacttgatgctgttgaagtcgggaaactggtcaaagaagatcgaagtggcgaaagccttc
aaaggagaggagatcagcgtgaatctaatcagctcagaatacgtggggttggacattcag
cagaagtttagtgccttctactctggaccaaagaggtacggaggtgaatcactcacacct
gagcaacatgacacgatgcaaatagcacaggctaacgctcagagatcacagggtgcaaca
cagagaatacagccaacaggtcagcaaacacaggctacggcacagaagagaacctccaca
tccacagaaaaggttccaggcaaaagacaatgtaaccacttctgcaaaaacaaggatcag
tgtggccacgactgctgtcaaaatggagtgccagtggttctgaggaggcctatgaatcag
cattcgagtttctcttcctacctccaagacctgaagaccaggagtgacacactgacggag
actccagtcaaacgcctcaaaatgagaatgagtggtgggactggggctacgaacattcat
caattttcttatacgcctgctgcttgcaggtatgtaggtaatcattatggcgcttcagca
atacaacagagtgtggaatcagctgaggacttcgcaacgccccaagagatggcatatctt
gagaactatgaccatgagtataatgactacctggaagacatatatcagacaatgggagaa
gaggaaccaccacctattcaaacccctacagagtcacaaagcacctcaatgtggaggaaa
cccagtgcctacaacggagggtcactcagccacagcaccccccaaagccagggcatgggt
tactcccaaagccacagcactactcaaagccagagcactggttacccacagagccacagc
acccaccaaacccatagcatgggttacccccaaagtcattttccccttcaaaaccagagt
agggaggaaacccagagtcacaataccccccaaagccagactagcggttacagcactccc
caaagccagagcaggagttactctccgagtcccatcgtagacttgaccgatgacagtggc
ttcctctcgtcgtcacacacccccagcgtgacctttgacctgggagacgaatgggatgat
tttgacgacgacaacttagttcacgccagtgagacatcatgcaccactgtagctaaaact
caggggatggaccgtgacaggctgaaaggtcactcaacaccactaccatccacttatgta
caacccaaaccccgcttcactgtgtccagtgccccactcaggtcaacctccccagttgtt
cctcagatagcagttactagtctctcagtcagaccacataacctccaggcttctgctccc
tggagccactctgacaacaaggccacaaggacattcagtgcaccctccttcccaaaacag
actgatacacgcatggctccgctgggaggacagtttgatttcttctcaaagacgactacc
caaaaawattacaatgcgactgacaaacggctccagggagaggacaacagcaaggaagtg
gaggcattcatgggtatatttgatggactattttag
DBGET
integrated database retrieval system
