Salvelinus sp. IW2-2015 (Arctic char): 111957182
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Entry
111957182 CDS
T05762
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111957182
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salp02000
]
111957182
Transporters [BR:
salp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
111957182
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
111957182
NCBI-ProteinID:
XP_023833700
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Position
LG32:complement(20881760..20968109)
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AA seq
652 aa
AA seq
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MSESNSNAACTADQNGAVPGEPVKTDKNSRRGNWGNQIEFILTSVGYAVGLGNVWRFPYL
CYRNGGGAFMFPYFIMLVFCGIPLFFLELSFGQFASQGCLGVWRISPMFKGVGYGMMVVS
TYIGIYYNVVICIAFYYFFSSMTNLLPWTYCNNPWNTPTCNGVVTPTGINNTLANVTRSL
VTKAAEVAVEVVNKTKRTSPSEEYWKHYVLQISDDIGNFGEVRLPILGCLAVSWVVVFLC
LIRGVKSSGKVVYFTATFPYVVLTILFIRGITLEGAVTGIKYYLTPQWHKILDAKVWGDA
ASQIFYSLGCAWGGLITMASYNKFHNNCYRDSIIISITNCATSVYAGFVIFSILGFMAHH
LNVDVSEVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAI
VDEIGTDWIVRNKTVVTGGVAIVGFLLGVPLTTQAGIYWLLLMDNYAASFSLVIISCIMC
ICIMYVYGHKKYFKDVEMMLGFPPPIFFRVCWRFVSPIIISFILIFTVIQYKPITYNDYV
YPGWSLAIGFLMAMSSVICIPIYALYKIAKSEGTTFLERLKNSCKPDVKWGPALSEHRIG
LYATPGSEGEVEVRPLKEELKEKEKEDEKRDEISLTIQGSNGSTAHNTTPSA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccaacagcaatgcagcctgtacagccgaccagaatggagctgttccagga
gaacctgtgaagacagataagaactccaggagagggaactggggaaaccagatagagttt
atcctcaccagcgtgggctatgccgtgggcctgggaaacgtatggaggttcccctacctc
tgctacagaaatggaggaggagccttcatgttcccctacttcatcatgctggtgttctgt
gggatccccctgttcttcctggagctctcattcggacagttcgccagccagggatgcctg
ggggtttggaggatcagccccatgttcaaaggtgtgggctacgggatgatggtggtgtcc
acctacatcggtatctactacaacgtggtgatctgcattgccttctactatttcttctct
tccatgaccaacctgctgccgtggacctactgcaacaacccctggaacacgcccacctgc
aacggcgtggtgacgcccacgggcatcaacaacaccctggccaacgtcacccgcagcttg
gtcaccaaggccgctgaggttgccgtggaggtggtcaataagaccaagaggaccagcccc
agcgaggagtactggaaacactatgttctgcagatctcagacgacatcgggaatttcggt
gaagtccgtctccctattctgggatgtctggccgtgtcctgggtggtggtcttcctctgt
ctcatcagaggagtcaagtcttcaggcaaggtggtgtacttcacagccacattcccctac
gtggtgctgaccatcctcttcatcagaggcatcaccctggagggagctgtcaccggcatc
aagtactacctgaccccacagtggcataagatcctcgacgctaaggtgtggggagacgct
gcctctcagatcttctactctctgggctgtgcatggggtgggctcatcactatggcctcc
tacaacaagttccacaacaactgctacagagacagcatcatcatcagcatcaccaactgt
gcgaccagcgtgtatgcaggctttgtcatcttctccatcctgggcttcatggcccaccac
ctgaacgtagatgtatctgaggtggccgaccacggtcccggcctggccttcgtggcctac
ccagaggccctcactctgctgcccatctcccccctctggtcactgctcttcttcttcatg
ctcatcctgctgggcctggggacgcagttctgcctgctggagaccctggtgacagccatt
gtggatgagattggtactgactggatcgttaggaacaagacggtggtcacaggaggagtg
gctatagtgggcttcctgctgggggtgccgctcaccacacaggctgggatctactggctg
ctgctgatggataactatgctgctagtttctctctggttatcatctcctgcatcatgtgc
atctgcatcatgtatgtctatggacacaagaaatacttcaaggacgttgagatgatgctg
ggtttcccccctccaatcttcttccgggtctgctggagattcgtgtcccccatcatcata
tctttcatcctgatcttcacagtgatccagtacaagcccatcacctacaacgactatgtg
taccccggctggtctcttgccatcggcttccttatggccatgtcctccgtcatctgcata
cccatctatgctctctacaagatcgccaagtctgagggaaccacatttttagagcggttg
aagaattcgtgcaagccagacgtgaaatggggcccggccctgagtgagcatcggataggc
ctctacgccaccccaggctcagagggagaggtggaggtgcgtcccctgaaagaggagctg
aaggagaaggagaaggaggatgagaagagggatgagatcagcctcaccatccagggcagc
aacggctcaacagcacacaacactacccccagcgcatag
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