Salvelinus sp. IW2-2015 (Arctic char): 111957203
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Entry
111957203 CDS
T05762
Name
(RefSeq) parafibromin
KO
K15175
parafibromin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111957203
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
111957203
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CDC73_N
CDC73_C
PemK_toxin
Motif
Other DBs
NCBI-GeneID:
111957203
NCBI-ProteinID:
XP_023833739
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Position
LG32:7843348..7908391
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AA seq
530 aa
AA seq
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MADVLSVLRLYNIQKKEIVAKGDEVIFGEFSWPKNVKTNYVIWGTGKEGQPKEYYTLDSI
LFLLNNVHLPHPSYVRRAATENIPVVRRPDRKGLLSYLNGESSTSTSIDRSAPIEIGLQR
PTQVKRAADEVSSEAKKPRIEDEERVRLDKERLAARLEGHKEGIVQTDQIRSLSEAMSVE
KIAAIKAKIMAKKRSTIKTDLDEDITLKQRSFVDAEVDVTRDIVSRERVWRTRTTILQST
GKNFSKNIFAILQSVKAREEGRAPEQRPAQNTTLVDQSIRNKQPVPAAYNRYDQERFKGK
EETEGFKIDTMGTYHGMTLKSVTEGASARKAQTPALQPVPRPVSQARPPPNQKKGSRTPI
VIIPAATTSLITMLNAKDLLQDLKFVTPEEKKKQGIQRDNEVLLQRRKDQIQPGGATLSV
TVPYRVIDQPLKLAPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIRAFHLKYD
EQKMDPNVQKWDVTVLELSHHKRHLDRPMFLKFWETLDRYMVKHKSHLRF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtattgagtgttcttcgcctgtacaacatccagaaaaaagaaatcgtcgcc
aaaggagacgaagttatctttggagagttctcttggccaaaaaatgtcaagactaactat
gtcatttggggaactgggaaggagggtcagccgaaggagtactatactctggactccatc
ctgttcctgctcaacaatgtgcatctccctcatccatcctatgtgcgaagggctgcaacc
gagaacattccagttgtcagaagacctgatcgaaagggcttgctttcgtatctcaatgga
gaaagttctacttcaacaagtatcgacagaagtgcccccatagagattggtttgcaaagg
ccaacacaagtcaaacgagcagcagatgaggtgtcatctgaagccaaaaaaccaaggata
gaggatgaggaacgagtgcgtctggacaaggagcgtttggctgctcgactggagggccac
aaagagggcattgtgcaaactgaccagatcaggtcactttccgaggctatgtcagtggag
aagatcgccgccatcaaagccaagatcatggcaaagaagcgctccaccattaagacagac
ctggatgaggacatcaccctgaagcagaggagctttgtggacgctgaggtggacgtgacc
agggacattgtcagcagagagcgggtgtggaggaccaggaccaccatcctacagagcact
ggaaagaacttctccaaaaacatctttgccatcctgcaatcggtgaaggccagggaggag
ggacgcgcccctgagcagaggccagcacagaacaccactctggtggaccagtccataagg
aacaagcaacctgtcccagctgcttataaccgatacgatcaggagagattcaaaggaaaa
gaggaaacggagggattcaagattgacaccatgggcacctaccacggcatgaccctgaaa
tctgtaacggagggagcgtctgccaggaaggcccagacaccagccctgcagcccgtcccc
agaccagtttcccaagccagacccccaccaaatcaaaagaagggctctcggacccccatc
gtcatcatcccagcggccaccacatccctcatcaccatgctcaatgcaaaggacctactg
caggacctcaagtttgtgacgccagaggagaagaagaagcagggcatccagcgggacaac
gaggtgctgctccagagacgcaaggaccagatccagcccgggggggccacgctcagcgtc
accgtgccctacagggtcatcgaccagcccctcaaactagctccgcaggactgggatcgc
gtggtggccgttttcgtgcaaggtcctgcctggcagttcaagggctggccttggctgcta
cctgacggatctcctgtggacattttcgctaaaatccgagccttccatctgaagtatgac
gagcagaagatggaccccaatgtgcagaagtgggacgtgaccgtgctggagctgagccac
cacaagcgccatctcgaccggcccatgttcctgaagttctgggagaccctcgacagatac
atggtgaaacacaagtcgcacctgaggttctga
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