Salvelinus sp. IW2-2015 (Arctic char): 111957214
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Entry
111957214 CDS
T05762
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111957214
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
111957214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
FXa_inhibition
EGF_3
hEGF
Plasmod_Pvs28
Rieske_2
Motif
Other DBs
NCBI-GeneID:
111957214
NCBI-ProteinID:
XP_023833759
LinkDB
All DBs
Position
LG4p:complement(12339680..12416896)
Genome browser
AA seq
1827 aa
AA seq
DB search
MLCQNGGVCIQKDRCLCPPTFTASAHHLGAGQSAAADQSEYILPLQSQQQSHSQPSGASG
LSMVKVRVQHPPEASVKIHQVLKVGYGPGTVREQSEMVTWSAGLSGARTSVLPGERAEAP
PPKPRVQAQTLHGDSTYTESSGFKYCFREVRNGQCSSPLPGLRSQDTCCRGIGLAWGINE
CVLCPPNTGNGVDGSCPAGFERINGTQCVDVNECLQPGFCENGNCVNTRGSYSCVCRQGY
ILDASHGICISRKVISEDKGQCYRILNSGSGRGSCSVPILRNITKQICCCSRVGKAWGKN
CERCPYFGSVAFKEICPAGPGYHYSASAIKFNQRVVEQHGTGGPPVISQSTPQTRPQQPA
QTSPQQSLSSGSLPPQTRPQQPGSTTLLTTLTRPQQPSSSGPYNPQIGSQQPSSSGALTP
QTRPQQPDGRALTPQTRPQQPSSGGSLSPQGRPHIPAISVTAGPTRVVTARPPTQTQRPP
VDRRPVSPVRPAQPLPSPVTPRPPIPRPVRGVCETMPQVCGQGRCVDQPGGRHTCICNEG
YQHNXQQTHCQDIDECRTSTPPCGSGRCQNTEGGYRCSCPSGYQPGPRGTSCIDVNECIQ
APSPCSVGECENTPGRYRCVCPAGFRANFQQTQCQDIDECRQVPNPCNNGRCENSPGSFK
CVCRTGYKLEGNTCKDVDECEDPLKCPGQACVNSPGSYKCVSCPPGFGLLNGQCRDVDEC
RQTPSLCTNGRCENTPGSYRCVCHTGYKLQGKTCADVDECEDPLRCPGQACVNSQGSYNC
VSCKPGFSMIDGQCSDIDECRQFPGPCTNGHCENTQGSYSCACLTGYRLHSDTCTDTDEC
ADPSQCPGQECVNSQGSYKCVSCKPGFGLVNRRCADVDECLHSPTRCANGRCENTAGSYK
CACPSGFRLQGNTCTDVNECENALQCPGQECINSEGSFKCVACSPGFXAGNGQCTDIDEC
RQTSNLCTNGLCENTLGSYRCACRPGFKLQDSICIDVDECEDPSQCPGQRCVNSEGSYKC
IACKAGHSMQDGLCADVDECQSPDTCGAARLCVNTDGSYRCDCQPGYRTTGLGRQCRDVN
ECLEGEYCFPKGECVNTEGSYRCVCSQGYTTSSDGSSCLDVDECARSGPGACQDGHCVNT
EGSYQCQCQVGFTTNPEKTACLDVDECSEGAVCRSQRCENTIGSYRCITSCEPGYRVTRT
GECVDINECANETVCGEHAFCQNQIGTYQCMCDQGYTATSDGKGCVDENECETMQGVCGA
ARCENVDGSFMCECPGEGEEFDTRSGQCLSTPQPGLPVFPGGSSSSSSTTGLGPQRRPDA
SQLPPARPGELRECYYNTEEQSSCSVLARNTTEQECCCTVGQGWGMGCQYDPCPQLGTAE
HQALCPSGRGYVTGLGAFSYKDVDECKLFHPEVCKSGVCVNNIPGYSCYCTSGYYYDNVF
LECIDVDECEAGEDSCPGGICVNTLGSHFCTCVPPLVLDDTQRSCVNSTGLAVDENLSFC
WQYVTPDLVCQSPLLGGQVTFTECCCLYGEGWGLQCALCPARDSEDYEARCNVFLRPPEF
PPPFPDRYGPDPGPGRGGGGGYRLPYRPDSFPDPIPRRPEYPRPDYDDYTPPGGSRSGFR
GRTPSTFRVPESPYRRPSGYIPERYYDEDDYGPPDAPPRSPFRTLPDPRSELAFGARPPL
PIPEGLPLSLAPLPDSDPYSEEEEVPEPWHVEPPFPDRRGPGGGGGGPRRVYERRYEPYA
GLGTEDCGILHGCENGRCIRVAEGYTCDCYEGYELDMTSMACIDINECEDPDNVCASGRC
INTDGSYRCVCHRGYVMSRRPNHCVAA
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgtcaaaatggaggggtctgcatccagaaggaccgctgcctctgcccgccaacc
ttcaccgcctccgcgcatcacctcggtgctggccagtcagcagctgctgaccagtcggag
tacattctccccctgcagagccagcagcagagccacagtcagcccagcggtgcgtctggc
ttatccatggtcaaggtgcgggtgcagcaccccccagaggcaagcgtgaagatccaccag
gtgctgaaggtggggtatgggccaggcacagttagggagcagtcggagatggtcacctgg
tcagcaggcctctcgggggccaggaccagtgttctgccaggggagagggccgaagcccca
ccacccaaacccagagtccaggcccagaccctccacggtgactccacctacacagaatcc
tccgggttcaagtactgcttcagggaggtccgcaacggccagtgcagctcacctctccca
ggactcaggagtcaggacacctgctgccgagggattggactggcctggggcatcaacgag
tgtgtcctatgtccccctaacacaggaaacggagtcgatgggagctgtccggctggattt
gagaggatcaacggcacccagtgtgttgatgttaatgagtgtttgcagccaggcttctgt
gagaacggcaactgtgtgaacactcgggggagctatagttgtgtctgcaggcaaggatac
atactggacgcctctcacgggatctgtatctcccgtaaggtgatctcggaggataagggc
cagtgctatcgtatcctaaactctggctctggccgtggtagctgctccgtgcccatcctc
aggaacatcaccaagcagatctgctgctgcagccgtgtgggcaaggcctggggcaagaac
tgtgagaggtgtccctactttggatcagttgctttcaaggagatctgcccagcagggcct
ggctaccactactctgcctctgccatcaagttcaaccagagggtggtggagcagcacggg
actggaggtccccctgtcatatcccagagcaccccacagaccaggccacaacaaccagcc
caaactagtccccaacaatctttaagctcaggctctctccctccccaaaccaggcctcaa
caaccaggtagcactactctgctcaccactctgacgagacctcagcaaccatcaagctca
ggcccttacaatccgcaaattggatcccaacaaccttcaagcagtggtgcactgactccc
caaactagaccccaacagccagatggtagagctctcacacctcagaccagaccccagcag
ccatcgagtggaggctccctgtccccccagggcagaccacacatcccagccatctctgtt
acagcaggacccacccgggtggtgacagctcgaccccccactcagacccaacggcctcca
gttgaccgacggccagtatctccagtgagacccgcccagcccctcccatctccggtcacg
ccccgcccacccatccccaggccagtgcggggtgtgtgtgagaccatgccccaggtgtgt
ggacagggccgctgtgtggaccagcccggagggagacatacctgcatctgtaacgaggga
taccaacacaacyctcagcagactcattgtcaagacatagacgagtgcaggacgtctacc
ccgccctgcggcagcggccgctgccagaacacagaagggggctacaggtgcagctgcccc
tctggataccagccgggaccacgsggcaccagctgtatagatgtcaatgagtgcatccag
gctcccagtccctgttctgttggggagtgtgagaatacaccaggccgctacagatgtgtg
tgtcctgctggcttcagagccaacttccaacagacgcagtgtcaagatattgacgagtgt
cgtcaggttccgaacccctgtaacaacggccgctgtgagaatagccctggtagcttcaag
tgtgtctgccgcactgggtacaagctagagggcaacacgtgtaaagatgtggatgagtgt
gaggaccccttgaagtgtcctggtcaggcctgtgtcaactctccaggatcatacaagtgt
gtgtcttgcccaccagggtttgggctgctcaacggacaatgccgagatgttgacgagtgc
cgtcagacccccagcctttgcaccaatggtcgttgtgagaacactcccgggagctacagg
tgtgtttgccacacgggatacaaactacaaggcaagacctgcgcagatgtggatgagtgt
gaggaccctttgaggtgtcctggtcaggcctgtgtcaactctcagggttcttacaactgt
gtgtcttgcaagccaggcttcagcatgatcgatggacaatgctcagatatagatgagtgt
cgtcaattccccggcccatgcaccaacggtcactgcgagaacacccagggtagctacagc
tgtgcgtgtctcactggctacagactacacagtgatacctgtacagacacggatgaatgc
gcagacccgtcccagtgccctggccaggagtgtgtcaactcccagggctcatacaagtgt
gtgtcctgcaagccaggctttgggctggtcaacagacgctgcgcagatgttgacgagtgc
ctccacagccccactcgctgtgctaacggtcgttgtgagaatacggctggaagctacaag
tgtgcgtgcccatctggcttcaggctacagggcaacacctgcacagatgtcaatgagtgt
gagaacgctctgcagtgtcctggtcaggagtgtatcaactctgagggctccttcaaatgt
gtggcctgtagcccaggctttsatgctggaaatggacagtgtacagatattgatgagtgt
cgccagacctccaacctatgtaccaacggcctctgtgaaaacactctcggtagctaccgg
tgcgcttgtcgccccgggttcaaactacaggacagcatctgtattgacgttgatgaatgc
gaagacccctcacagtgtcctgggcaacggtgtgtgaattctgaaggctcctacaagtgt
atcgcctgcaaagctggccacagtatgcaagatgggttatgcgcagatgtggatgaatgc
cagagccctgacacctgtggtgcagcgaggctgtgtgtgaacacggacggctcctaccgc
tgtgactgtcaaccaggctacagaaccactggccttggacgccaatgtagagatgtcaac
gagtgtctagagggggagtactgcttccccaagggagagtgtgtgaacacagagggctcc
taccgctgtgtgtgttcccagggttacaccaccagcagcgacggcagctcctgcctagat
gtggatgagtgtgccaggtcaggcccgggggcgtgccaggatgggcactgtgtcaacaca
gagggctcctaccagtgccagtgccaagtgggattcaccaccaacccagagaagacagcc
tgtctggatgtagatgagtgctcagagggagcagtgtgtcggtcacaacgttgtgagaac
accattggctcctaccgctgtatcacctcctgtgagccgggctaccgggtcacccgcaca
ggagagtgcgtcgatatcaatgagtgtgccaatgagaccgtatgcggggagcatgcgttc
tgccagaaccaaattggaacataccagtgcatgtgtgaccagggctacacagccaccagc
gatgggaagggatgtgtggatgaaaacgagtgtgagactatgcagggcgtgtgtggcgcg
gcgcgctgtgagaatgtggatggctccttcatgtgtgagtgtccaggagagggggaggag
tttgatacgcgctcaggacagtgcctcagcacgccccaaccaggtcttccagtgttccct
ggcggctcctcctcgtcttcctccaccaccggcctcggtccccagcgtcggcccgatgcg
tcccagctgcctcctgcccggcctggcgagttgagggagtgttactacaacaccgaggag
cagagctcgtgcagcgtcctggcccgtaacaccactgagcaggagtgctgctgcaccgtg
ggccagggctggggcatgggctgccagtatgacccctgtcctcagctaggcacagccgag
caccaggcgttgtgccccagcggacgaggatatgtgactgggctaggagcgtttagctac
aaagatgtggatgagtgtaaactgttccaccctgaggtgtgtaagagcggtgtatgtgtc
aacaacatccctggctactcctgctactgcaccagtggctactactacgacaacgtgttt
ctggagtgcatcgatgttgatgagtgtgaggcaggggaggacagctgtccagggggaatc
tgcgtcaacacattaggctcacacttctgtacctgcgtgcctcctcttgtgttggacgac
actcagcgcagctgtgtcaattccactggcctcgccgtggatgagaacctgtccttctgc
tggcagtatgtcacaccagacctggtgtgtcagagccccctgctgggcggacaggtcacc
ttcactgagtgctgctgtctgtatggagagggctggggactgcagtgtgctctgtgtcct
gccagagactcagaggactatgaggctcgatgtaacgtcttcctgaggcccccagagttt
cctccccccttccctgaccgctacggtccggacccagggccaggtagaggaggagggggg
gggtatcgcctgccatatagaccggactccttcccagaccccatcccccgcaggcctgag
tacccccggcctgactatgacgactacacaccaccaggggggagcaggtctggcttcaga
ggcagaacgcccagcaccttcagggtcccagagagcccatacagacggccctcaggatac
attcctgagcggtactatgacgaggacgactacggcccgcctgacgcgcctccgagatct
cccttccgcaccctcccagaccctcgttctgagcttgcctttggggcgaggccccctctt
cccatccccgagggcctccctctgagtctggcccccctcccggacagtgacccctacagt
gaggaggaggaggtgccagaaccctggcatgtggaacccccgttccctgacagacggggg
ccaggtggtggaggcggaggcccaaggagagtctatgagagacgatatgagccgtatgca
ggcctgggcacagaggactgtgggatactgcatggctgtgagaacggcaggtgtatccgt
gtggcggagggatacacgtgtgactgctacgagggatacgagctggacatgacctccatg
gcctgcatagacatcaatgaatgtgaggatcccgacaacgtgtgtgcgagtggccgatgc
atcaacacagacggctcctatcgctgtgtgtgtcaccgaggctacgtcatgtcccgtcgg
cccaaccactgtgtggcagcatag
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