Salvelinus sp. IW2-2015 (Arctic char): 111957281
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Entry
111957281 CDS
T05762
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111957281
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
111957281
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
DALR_1
IRK
Motif
Other DBs
NCBI-GeneID:
111957281
NCBI-ProteinID:
XP_023833838
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Position
LG32:complement(10399976..10458946)
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AA seq
965 aa
AA seq
DB search
MRHRYAGAVHQHQIPDEERGSVQSQDPNPVAPDFSLPPPPPSFRERSTTTSHYLNHHQLP
CLSKPSRRGIHACHPQHGDPPPLTSYDIAQRPSHGVCEPAGQPAHLQQNLWAAAGSQPQS
EQPVFQSCNCNFPEKASLSHQRQPLAHPPQPSPSLPPSSSLLFLQESNHGDNLQSSDNYQ
QASNVERCRGGGGGGGHRDQKQLLQQQQQQHSRLQHRDPSPEATRANSQKGRTINVCESI
EANRRAFESQTQDLQQLQQLPQLRAQQQLLVGSSFPVYYCANGSGELCRNNQAPLLQQHQ
QDALGRPQHCDQDRNKPGRTNQANQPQHPNQPHHHCRDSRVNSPTQPYGGNSSXTGSSSK
SSPNYGSSYHLWPESPHKGEERILIDHHQATTEQKKLSHAGSNPSLSESSGRLPQIAMNT
CKHNGGVVRPLGSLASSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGEDPGKASNESLV
RDGNGAPVKKNKDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYGKE
SSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLV
CAIHPIPGHYRFTWTARIAFTYTPSTANADVDIILSIPMFLXLYLIGRVMLLHSKLFTDA
SSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDTQEVTS
NFLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAE
KHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQAQ
KLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGMLEDKLDSVTGS
LQALPCLISQAITQQQQEFLDGFLHRFRPASLGSERSERSERSWTSTARRRRSPSTAPHT
SSDSG
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcgatacgcgggagctgtccatcagcaccaaatccccgacgaagagcgaggc
agcgtgcagagccaagacccaaacccagtcgctccggatttcagtctgccgccccctcct
ccgtctttcagagagcgttcgactaccacctcgcactacctgaaccaccaccaactgcct
tgtctgagcaagccctctcgaagaggtatccatgcctgtcatccgcagcacggcgaccca
ccgcctctgacaagctacgacatcgcccagcgaccttcacacggggtctgtgaacccgcc
gggcagccagcgcaccttcagcagaacctttgggccgcagccggctcccagccgcagtcg
gagcagcctgtttttcagagctgcaactgcaattttcccgagaaggcgagcctttctcac
cagcgccagcccctcgctcacccgccgcagccctccccatctttgccgccgtcgtcctct
ctgctgtttttgcaggaatctaatcacggggataatttgcaaagcagtgacaattatcaa
caggcgagcaacgtggaacgctgccggggaggaggaggagggggagggcaccgagaccag
aagcagttgttgcagcaacagcagcagcagcacagtagactccaacacagggacccctcc
cctgaagcaacccgagcaaactcgcagaaggggcgcactataaatgtatgtgagtcaatc
gaggctaatcggcgagcattcgagtcccagactcaggacctgcaacagctacagcaactc
ccacaattgcgagctcaacaacagctactggtggggagcagcttccctgtctactactgc
gccaacggttcaggagagctctgtcggaataaccaggcaccactgctgcaacagcatcag
caagacgcactggggcgtccgcagcactgtgaccaagaccgcaataagccagggaggaca
aaccaagccaaccagccacagcaccccaaccagccgcatcaccattgccgcgactctcgt
gtaaactcaccaacgcagccgtacggagggaactcgtctrcgactggcagtagcagcaag
agcagccctaactacggctccagctatcacctgtggcccgagagcccgcataagggagag
gagaggatactcatcgatcatcatcaggcaaccactgagcaaaagaagctgagccatgct
ggatccaacccctccctctccgagagcagcggccgactccctcagatagccatgaacacc
tgcaagcacaatggcggcgtagtgagaccactgggcagcctggcgtcgtcgcggcgcaac
ctagcagagctcgactccgaaacacagcccctccagacgctgcacagttctggcctggag
gtggtggtttccaagggcaacggtgaggaccccggcaaggcgtccaacgagagcctggtc
agggacgggaacggtgctcctgtgaagaagaayaaagacatcggctataggctcggccac
cggagggcgctctttgagaagcgaaagagactcagtgactacgcactcatcttcgggatg
tttggaattgtcgtcatggtgacggagacggaactgtcctggggagtttacggcaaggaa
tcttcgtactcatttgcactgaaatgccttatcagcctttccactgttatattgcttggt
cttataataatgtaccatgcccgggaaatccagctgttcatggtggacaatggggcggac
gactggaggatagccatgacgtacgagcgcatcttcttcatcgtgctggagctgctggtg
tgcgccatccaccccatcccgggccattaccgcttcacgtggacggcgcggattgccttc
acctacacgccgtcgacggccaacgccgacgtggacatcatcctctccatycccatgttc
ctsmgsctctacctgatcggccgcgtcatgctgctgcacagcaagctcttcacggacgcc
tcgtcgcgcagcatcggcgccctcaacaagatcaacttcaatacgcgcttcgtcatgaag
accctcatgaccatctgccccggcaccgtgctgcttgtcttcagcatctcctcctggatc
attgccgcctggacggtgcgcgtctgcgagaggtatcatgacacacaggaagtgaccagt
aacttcctgggagccatgtggctcatctctattaccttcctctccattggctacggagac
atggtacctaacacgtactgtgggaaaggcgtatgtctgcttacagggatcatgggagcg
ggctgcactgcgctggtggtcgccgtggtagccaggaagttggagttgaccaaggctgag
aagcatgtccacaacttcatgatggacacacaactctgcaaacgagtaaagaacacagct
gccaatgtactcagggaaacatggctcatctacaaacacactaagctggtcaagaagata
gatcacgctaaagtgcgcaagcaccagcggaagtttctacaggccatccatcaagctcag
aaactacgcagtgtaaagatggagcagaggaaactcaacgatcaggccaacacgctagtg
gacctggcgaagacccagaacgtgatgtacgacctggtgtcggagctgcaggagcgcagc
gaggagctggacaagcgcatcggcatgctggaggacaagctggactcggtgacgggcagc
ctacaggcgctgccctgcctcatctcccaagccataacccagcagcagcaggaatttctg
gacggtttcctgcaccgcttccggcctgcctcgctgggctcagagcgctccgaacgctca
gagcgctcctggacctccaccgcccgccggcgccgctcgccctccacggcgccgcacacc
tcctctgacagcggctag
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