Salvelinus sp. IW2-2015 (Arctic char): 111957328
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Entry
111957328 CDS
T05762
Name
(RefSeq) neuronal PAS domain-containing protein 3-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111957328
Transcription factors [BR:
salp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
111957328
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS
HLH
PAS_4
PAS_3
PAS_11
Motif
Other DBs
NCBI-GeneID:
111957328
NCBI-ProteinID:
XP_023833892
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Position
LG4p:16714279..16738358
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AA seq
708 aa
AA seq
DB search
MPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELXSSS
SLQNLRKEKSRNAARSRRGKENFEFFELAKMLPLPGAITSQLDKASVIRLTISYLHMCTF
ASQGDPPWCPLLEGENHCSKVRRSSHSLATDMFEQHLGAHLLQSLDGFVFVVSSEGRFLY
ISETVSIYLGLSQVELMGSSVFDYIHPADHVEMAERLGIRPHLRAEAGCHVAPESASSSA
STSSLAGTPEPAPSSPLSPGNEPPDRGFFIRMKSTLTKRGLHVKSSGYKVRPSGCGEGSG
VVDLWLVGLSKYLRATLWLQRTVAGQHESPTGNSNVIWVNYVISRTELPDTPLDLLQLPE
SLRAERLKASSSPSELSPQARGPQPMKSSVCKGDPDSKLREIYNPGVQSGDRRKRPLRSD
SEGAPPETRRRLEEFRQREGSVSASSDMGSESEGEERAWEQGGDSARVKREEGPSKQGGE
TPVRGERGGRVHNGRAVIQHLKSVVSSPLSGPHNIKTEHEALAAGGRWTHTQPPPSHTHT
PCGSLNGDSPPTPIPDSSSSSEAPPKGIFTPPSPAMSPPMSGSSPLPCEERGMLSGGRGG
GPDFELLQRLAAGGAAGRVLFHPLTLGPQGPQSLYAPSTIRYAPPELPPSHPGAEGLRSD
HHKGPPAFYPHLQRLAGLPSFSGFSASDNPFNPFCMNGLRGAAGSEED
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcgtcagcgagggaaagtgtgtgagcgtggagtgggacttcctacagggacta
ctggccaaaccccccaccctgccttgtttgcagaacctgcggaaggagaagtctcgtaat
gccgctcgttcccgtcgcggcaaggagaactttgagttctttgagctgntctcctcctcc
agtttgcagaacctgcggaaggagaagtctcgtaatgccgctcgttcccgtcgcggcaag
gagaactttgagttctttgagctggccaagatgctgcctctccccggggccatcaccagc
cagctggacaaggcctcggtcatccgtctcaccatcagctacttgcacatgtgcaccttc
gccagccagggagacccgccctggtgccccctgctggagggagagaaccactgcagcaaa
gtgcgacgctcctcccactctctggccactgacatgttcgaacagcacctgggagcacac
ctgttacagtctctggacggctttgtgtttgtggtaagctcggagggacgattcctctac
atatcagagactgtttccatctacctgggcctctcacaggtggagttgatgggcagcagt
gtgtttgactacatccacccagcggaccatgtggagatggctgagcgtctgggcatcagg
ccccacctgagggccgaggctggctgccacgtggcccctgagagcgcttccagctctgcc
tccacatcctccctggcagggacccctgagcctgccccctcaagccctctctctccaggg
aacgaaccgcctgaccgaggcttcttcatccgtatgaagtccaccctcaccaagagaggc
ctccacgtcaagtcctcgggctacaaggtcagacccagtggttgcggggaagggtcaggg
gtggttgacctatggcttgtgggtctgtccaagtacctacgtgccacgctgtggctccag
agaacagtagcaggtcaacacgagagccccactggcaacagcaacgtcatctgggtaaac
tacgtcatcagtcgaacagagctcccagacactcccctggatctgctgcagctcccagag
agtctgagggcagagcgtctgaaagccagctcctccccttcggaactctcgccacaagcc
cggggtccacagccaatgaaaagctctgtgtgtaaaggtgaccctgactctaaactgaga
gagatctataatcccggagtccagtcaggggacaggaggaagcgtccgctgcggtctgac
tctgaaggcgctcccccggaaacgcggcgtcgcctggaagagttccgccagagagagggg
agtgtgtccgcctcctcagacatgggcagtgagagcgagggagaggagagagcgtgggag
caggggggagacagcgcgagggtcaaacgagaggaggggccttcgaaacaaggtggggag
accccagtgaggggcgaaaggggtggcagggtgcacaacggccgtgcggtaatccagcac
cttaagagtgtagtgtcctcgcctctctctggtccccacaacatcaagactgaacatgag
gcactggctgcagggggtcgctggacacacacacaacccccaccctcgcacacacacacc
ccctgcggtagcctgaacggcgacagtcccccgacccctatcccagactcctcctccagc
agtgaagccccacccaaaggtattttcaccccgccctcccccgccatgtctcctcccatg
tccggctcctcccctctaccttgtgaggagcggggaatgttgtctggaggccgggggggc
gggcctgactttgagctgttgcagagactggcagcggggggtgctgcaggacgggtgctc
ttccaccccctgaccctcggcccccaggggccacagagcctgtacgcccccagtaccatc
cgctatgcgcccccagagctgcccccctctcaccccggtgctgaggggctgcgctccgac
caccacaagggacctccagccttctacccccacctccagaggctggccggcctgccctcc
ttcagtgggttctctgcctcggacaatcccttcaaccccttctgtatgaacggactgagg
ggggccgcagggtccgaggaggactga
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