Salvelinus sp. IW2-2015 (Arctic char): 111957394
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Entry
111957394 CDS
T05762
Symbol
sart3
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111957394 (sart3)
03036 Chromosome and associated proteins [BR:
salp03036
]
111957394 (sart3)
Spliceosome [BR:
salp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111957394 (sart3)
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
111957394 (sart3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
LSM_int_assoc
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
RRM_occluded
HAT_Syf1_CNRKL1_C
Lsm_interact
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
111957394
NCBI-ProteinID:
XP_023833960
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All DBs
Position
LG33:complement(21669107..21684867)
Genome browser
AA seq
953 aa
AA seq
DB search
MAATGNAEESQLQEMEEETGMEREMDSDXEEGMGIENSDDSSEDDKENEAEIQRLEEQLS
INAFDYNCHVDLIKLLRQEGELPPLRKARQKMSELFPLTEEIWLDWLKDEIRLTEEEQNR
EKVYXLFEMAVKDYICPEIWLEYAQYSIGGMGLPGGMEKVRYIFERALTAVGLHMTKGAT
VWEAYREFENVILATVQPPPGSVPTCEQQALLNAQLERIHTLFRRQLAIPLLDMEGTYAE
YEEWSDQGVSDTVSQKFKRALQQMEKSKPYEETLMAAEPPKLVEYQTYIDYEQKEGDPAR
IQIIFERALAENCLVPDMWAKYTKYLDRQLKIKDLVLSSHDRAVRNCPWTMGLWKNYLLA
LERHGADHQTISDVFEKALNAGFIQATDYVNIWEAYLDYLRRRVDFSKGESTLTLESSRE
LEELRAAFTRSLDYMKQDVEERFSESGDPSCTIMQVWAKIEALHCKNIQKARELWDSIMT
KGNAKFANMWLEYYNLERSYGDALHCRKALHRAVQCTSDYPEHVCEVLLTFERVEGSLED
WDAAVQKTETRLNRVNEQRAKVAEKEAHLVRQEEEKTEQRRRAKADKKNQKKGQKGSRPG
EKRKAEDEDNEDEWGEESEQPPKRHRGEGNQGSFRGGGAEEFMETESGLFGRRAPPCRRQ
EPPGAKRGQQIAPATVRKTQEDNPEQRKDDCSVFISNLAFSMEDPEKRLKELFESCGPVQ
SVRPVYAAKGFRGYCYVQFEGKTSVPEALKMDRREVDGRPMFVSLCVDKNKNPDFKVFKY
NTNLEKHKIFISGLPFSCTKEQLEELCNDQGTIKDIRLVTNRSGKPKGLAYVEFEDEAQA
SQAVVKLDGTVLQEHTLSVAISNPPRRTXADKPDFSRPMGAMMPRAMVYGSRGKGRTQLS
LIPRSLHRQXGSESKAENGTAPKPTGGASGDAGFEAQAKPMSNSDFAKMLLRK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacggggaacgcagaagagtcgcagttgcaagagatggaggaagagacaggg
atggaaagagaaatggattcagatmwagaggagggtatgggaatcgaaaattccgacgat
tcgtcagaagatgataaagagaatgaagccgaaattcagcgtttggaggagcagctgtcc
atcaatgcttttgactacaactgtcatgtggacctcataaaactcctgaggcaggagggg
gaactgcctccattgcgtaaggcaaggcagaagatgagtgagctcttcccactgactgaa
gagatatggctggactggctcaaggatgagatccgcctaaccgaggaggagcagaaccgg
gagaaagtctacyagctctttgagatggctgtgaaagattatatctgccctgaaatctgg
ctggagtatgcccagtactctatcgggggcatgggactgcctggtgggatggagaaggtg
aggtacatcttcgagagagccctgacagccgtggggctgcacatgaccaaaggggctact
gtgtgggaggcctacagggagtttgagaacgtcatactggcaactgttcagcctccccct
ggcagtgtccccacctgcgagcagcaggcgcttctgaacgctcagctcgaacgcatccac
actctgttccgccgccagctggccatccccttattggacatggaaggaacatatgcagag
tatgaggagtggtctgaccagggggtgtctgatacagtctcccagaagttcaagagggcc
ctgcaacagatggagaagagcaagccttatgaggagactttgatggcagccgagccaccc
aagctagtagaatatcagacctacattgactatgagcaaaaggagggtgacccggcacgg
atccagatcatctttgagcgggcactggcagagaactgcttggtaccagacatgtgggcc
aagtacaccaagtacctggatcgtcaactaaaaatcaaagacctggtcctgtcctctcac
gaccgtgcggtcaggaactgcccctggaccatgggcctgtggaagaactacctgcttgcc
ctggagaggcatggggccgaccaccaaactatatcagacgtttttgaaaaggccctgaat
gccggattcatacaagctacagattatgttaatatctgggaagcgtacctcgattacctg
aggaggcgtgtcgatttcagcaaaggtgaaagcaccttaacattggagtcaagcagagag
ctggaggagctgcgggcagccttcacccgttctctagactatatgaaacaggatgttgaa
gagagatttagtgaaagtggagacccttcctgtaccatcatgcaggtctgggcaaagata
gaggccctgcattgtaagaacattcagaaagctagagaactgtgggacagcatcatgaca
aaagggaatgccaaattcgccaacatgtggctggagtactataacctggagaggtcgtac
ggagatgctctccattgcaggaaagccctccacagggccgtccagtgtacctccgactac
cctgagcatgtgtgtgaggtcctgctcacctttgagagggttgaggggtctctggaggac
tgggatgcagcggtgcagaagactgagacaaggctgaacagagtaaacgagcagagggcc
aaggtggcagagaaagaggcccatctggtccgacaggaggaggagaagactgaacagcgg
cggagggccaaggcagacaagaagaaccaaaagaagggacagaaaggcagcaggcctggg
gagaagaggaaggcagaggatgaggataacgaggatgagtggggggaggaatcggagcaa
cctccaaagaggcaccgaggggagggcaaccagggcagcttcaggggaggaggtgctgag
gagttcatggagacagagagtggactgtttggaaggagagctcccccttgccgcagacag
gaaccccctggtgctaagaggggccagcagatagcaccagccaccgtacggaagacccag
gaagataaccccgaacaacgcaaggatgactgcagtgtgtttatcagcaacctggccttc
agcatggaggatccagagaagagactgaaggagttgtttgagtcctgtggtcctgtccag
tcagtgcgccccgtctatgctgccaagggcttcagagggtactgctatgtacagtttgag
ggcaagacgtccgtgccrgaggccctgaagatggaccggcgtgaggtagacggcaggcca
atgttcgtatcgctctgtgtggataaaaacaagaaccctgattttaaggtatttaagtac
aacacaaacctggagaaacacaagatctttatctcgggcctgcccttttcctgcaccaag
gagcagctggaggagctgtgtaatgatcaaggcaccatcaaagacatccgcctggtcacc
aaccgctcaggcaaacccaagggtctggcgtacgtggagtttgaagatgaggctcaggcc
tcccaggccgtggtgaagttggatggcacggtactacaggaacacacactctctgttgcc
attagcaacccacctcgcagaactgkagccgacaagcctgacttcagcaggcccatggga
gccatgatgccacgggctatggtctatggatcgaggggaaaagggagaacccagctctca
ctaatccctcgttccctacatcggcagyctggatcagaaagtaaagcagaaaatgggact
gcacctaaacccacagggggtgcatccggagacgctgggtttgaagcacaggccaagccc
atgtccaattcagactttgccaaaatgcttctcagaaagtga
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