Salvelinus sp. IW2-2015 (Arctic char): 111957411
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Entry
111957411 CDS
T05762
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome homolog isoform X1
KO
K28154
splicing regulator ARVCF
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111957411
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111957411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
Arm_2
Cnd1
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
111957411
NCBI-ProteinID:
XP_023833982
LinkDB
All DBs
Position
LG33:26715828..26910822
Genome browser
AA seq
1096 aa
AA seq
DB search
MEDYDVRSAASILASVKEQEARFERLTRALEEERRNVSLQLERSNVPPDRLGGTGPSANL
PPNSQPLAWQQVVMQEQSPSNQTSLAMMQEPQEMVEETVTIEEDPGTPTSHVSVVTSDDG
TTRRTETKDMSTNLKVTKVIKTITRRRYLPVTVTKTLVVPGGSIIQQSKPSTLVPTPSPT
PSPSETDPVTKMVKTVTTRTVRQVPLGPDGLPLPEGSSPLGSYTDSIDRRYLKNGERYIT
TPQATSTLTRSYNNYNDSYSDALPPDAGGSQYGGRHYGLHDGYGIGDATDNYGSLSRGVN
FRPPRYPYAMANSYRPENSYGTLPIRKDDYGHVAQPQVPMGNSSVDLNRSQPERFQPEPY
GLEDDRRSLGPEEEEPYDLEPDYSTASQCQGTLPGTNRGRTMREPLRDGPRIRGYEDPIE
AEMIDERHPYIHGMYPAPLAQPERGSMASLDRLAGRRSPSIDSIRKDPRWRDPDLQEVIA
MLGHPIDPVKSNAAAYLQHLCYENDKIKKDVRQLKGIPVLASLLDHPKAEVHRKACGALR
NISYGKDHDNKVAIKNCDGIPALVRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHG
LQTLTNEVIIPHSGWEHEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECEG
LVDALLHALQSAVGKKDMDNKSVENCVCIMRNLSYHVHKEIPGAEKFTDPSVLQAPGSAG
PQRKKKDDAGCFGGKKAKEEWFNQARKNGENDKNYDTLDLPKRTEPTKGFELLYQPEVVR
LYLSLLTESQNYNTLEAAAGALQNLSAGQWTWSNYIRATVRKEKGLPILVELLRSDSDKV
VRAVAIALRNLSIDRRNKDLIGSYAMRDLVSNLPSGQQQPAKNLEEDTVVAILNTIHEIV
TDSSENARSLIQAQAIXKLVAINKTSQSPREDKAASHVLQTVWSYKDLRNALTKEGWNKS
HFQPTATGAPKAAKNGKPGYDDTTLPLMEKNQGQSVMAGETGDPPGLAYCGELSTKKNGS
GDMIPMDELGPDGYSTIDQRDKDCKYKSSGDGSVDLSEREPLKNDTNRKHYVRSNRPAVK
LVDACDVKPQPVDSWV
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggaggattatgacgtgcgctcggccgccagtatcctggcctcggtgaaagagcaggag
gcgcgcttcgagcgtctgacccgggccctggaggaggagcgacgcaacgtctccctgcag
ctggagcgttccaatgtaccccccgacaggttgggagggactgggcctagcgctaacctg
ccacccaacagccaacccctggcctggcagcaggtggtgatgcaggagcagagccccagt
aaccagacgtctctggccatgatgcaggagccccaggagatggtggaggagacggtcacc
atcgaggaggaccctggcacgcccacctcccacgtgtccgttgtcacctccgacgayggc
accacgcgacgcacagaaaccaaggatatgtcaactaacctgaaggtgaccaaggtgatc
aaaaccatcactcgccgcaggtacctgccagtgaccgtcacaaagaccctggtggtgcca
ggaggttccatcatccagcagtccaaacccagcaccctggtgcccaccccttctcccacc
ccctccccatcagagacagacccagtgactaagatggtgaagacggtgaccacgcggacg
gttcgccaggtgcccctgggccccgacggcctgcccctgcctgagggctcgtccccgctg
ggcagctacacagactccatcgaccggcgctacctgaagaatggcgagcgctacatcacc
acgccacaggccacctccacgctcacacgctcctacaacaactacaacgactcctacagc
gacgcactcccccccgacgctggtgggagtcagtacggtgggcgccactacggcctccac
gacggctacggcattggagacgcgacggacaactacggcagcctgtcccgcggagtcaac
ttccggccaccccgctacccctacgctatggctaacagctatcggccagagaacagctac
gggaccctacccatccggaaggatgactacggccacgtggcccagccccaggtccccatg
ggcaacagcagtgtggacctgaaccggtcgcagccagaacgcttccagccagagccatac
ggactggaggacgaccgccgcagcctgggccccgaggaggaggagccctatgacctggag
cctgactactccactgctagccagtgccaaggcacgctgccaggcaccaaccgcggcaga
accatgagagagccgctccgcgacgggccacgcatcaggggttacgaggatcccatcgag
gcggagatgattgacgagcgacacccctacatccatggcatgtacccggcccccttggcc
cagcccgagagggggagcatggccagcctggaccgcctggctggccgccgctcgccctcc
atcgacagcatccgcaaggacccgcgctggcgtgaccccgatctgcaagaggtcatagcc
atgctgggccacccaatcgacccggtcaagtctaacgctgccgcatacctgcagcacctg
tgctacgaaaacgacaagatcaagaaagatgtgcgtcagctgaaggggatcccggtgctg
gcaagcctgctggaccatcccaaggctgaggtccaccgcaaggcctgcggagccctgagg
aacatctcctacggcaaggaccacgacaacaaggtggccatcaagaactgtgacggtatc
cctgcccttgtccgcctgctgaggaagaccaacgacatggaggtccgcgagctcatcaca
gggaccctgtggaacctgtcttcctatgagcctctgaagatggtgattataaaccacgga
ctgcagactttgaccaacgaggtcatcatcccccactcaggctgggagcatgagcccaac
gaggactccaaacctcgtgatgcagagtggaccaccgtcttcaagaacacatcaggatgt
ctgaggaatgtgagttcggacggggccgaggcaaggcgcagactaagggagtgtgagggg
cttgtggatgctctgctgcacgccctgcagtcagctgtgggcaagaaagacatggacaac
aagtctgtggagaactgtgtgtgtatcatgaggaacctgtcttaccacgttcacaaagag
atcccaggggcagagaagttcacagacccgtccgttctgcaggccccgggctctgcgggc
cctcagaggaagaagaaggatgacgcaggctgctttggagggaagaaggccaaagaggaa
tggtttaatcaagccagaaaaaacggcgagaatgacaaaaactacgatacgctggatcta
cccaagcgcacagaacccacaaaaggttttgagctgctgtaccaaccggaagtggtgagg
ctgtacctgtctctgctaactgagagccagaactacaacactctggaggctgccgcaggg
gccctgcagaacctcagcgccggacagtggacctggtccaactacatccgtgccacagtg
aggaaggagaagggtcttcccatcctggtggagctgctgcgttctgactctgacaaggtg
gtccgagccgtggccatcgccctgcgtaacctctccatcgaccgccgcaacaaagacctg
atcgggagctatgccatgagggacctggtgagtaacctgcccagcggtcagcagcagcca
gccaagaacctggaggaagacacggtggtggccattctcaacaccatccacgagattgtg
acggacagctccgagaacgcacgctccctcatccaggcccaggccatcgamaaactggtg
gccatcaacaagacaagccaatcaccacgtgaggacaaggccgcctcccacgtgctgcag
acggtgtggagctacaaggacctgaggaacgccctgaccaaggaaggatggaacaagagc
cacttccagcctacagcgaccggcgcccctaaagcagccaagaatggcaagccaggctat
gacgacaccactctgcccctgatggagaagaaccaaggtcagtctgtgatggcaggcgag
actggggatcctccgggcctggcctactgtggtgaactgagcaccaagaaaaatggaagt
ggtgatatgatacctatggacgagcttggtccagatggctactccaccatcgaccagaga
gacaaagactgcaagtacaagagtagtggagacgggtcagtggacctgtcagaacgggag
ccattaaagaatgacacaaataggaaacactatgtcaggagtaacaggcctgcagtcaaa
ctggtggatgcttgtgacgttaaacctcagcctgttgactcctgggtctaa
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