Salvelinus sp. IW2-2015 (Arctic char): 111957460
Help
Entry
111957460 CDS
T05762
Name
(RefSeq) low-density lipoprotein receptor-related protein 1B-like
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
LDLRAD1_C
EGF_LRP2
Vgb_lyase
hEGF
EGF
EGF_3
C5orf34_C
Motif
Other DBs
NCBI-GeneID:
111957460
NCBI-ProteinID:
XP_023834057
LinkDB
All DBs
Position
LG33:complement(11139986..11148773)
Genome browser
AA seq
1506 aa
AA seq
DB search
MAFYLLLCIAILEISVLRAAVRTPLKCNLGTKPCKDGSECILYQHVCDGEVDCRDGSDEE
DCTVTCTKGQFLCTHGKKCIDQKQVCDGVAQCQDRSDEVDCLKDMEGCAHHCDNTTRCLP
KTFLCDGEDDCLDGTDEANCDSDSDGHKNHHDVEVSENESSNYKGFTTMSAPAPLKCPFG
TKPCQDKTECVLYSHVCDGDADCKDGSDEQTCSLECENGEFQCAHGMKCIDQRQVCDGVA
QCQDRSDEMHCLKPMEGCAHHCDDKTRCLPDTFLCDGERDCLDGTDEANCDSDSTDDHKN
HRYFVAEDYDGNNEGNATSMSAPAPLKCIFGTKPCQNNIECVLYSHVCDGEADCKDGSDE
EGCSLECGSGQFQCAHGKKCVDQRQVCDGVAQCQDRSDEMHCLKPMEGCGHHCDDKTRCL
PDTFLCDGERDCLDGTDEANCADESCSSGEFRCTSGQCASISMRCDGHPDCWDHSDEESC
TKPPQCTTNRRCPHSQECLLEEWVCDGEQDCKDGSDEKDCKMFQLKCGEFQWACTSKSQC
VPKAWRCDGTKDCADESDEAGCGQVETCPSHQFQCASMSECLDTALVCNLVRNCADGSDE
GGDCETKCPDKALCVQNCYSTPQGTRCGCKAGYQLDKDAVSCGDIDECEGGRQVVCSHSC
VNTQGSFHCHCNPGYLLESDGRRCKIMGEPYLLASVQTDLFLVGLRSSSLDVLVSSAKKA
ILSVDYDWRDQRVFWVSLDSESIKWSSLDQKKRGTLFKGIKSDCIAVDWVGRNLYWIDGI
GGGRIIAIGLNSTITRALDLTVILDKDFEQPLSLALLPQKGLMFWSEISNEVKIERAGMD
GSERRVVVSHSLSWPGSLAVDPIGERLYWTDKKLGCIGSATLDGGDIKILQLTETTNPFS
VTVFNDLLYWSDTKRGTIQGANKITGKNRQVILKRPAQPFGLKVIHPLLQTSTDSPCEKL
RCSHLCVLAPGPKGVCKCPSGLLLADDGLNCSNLVNSAFLLVLSPTVVTQIYLQTMLSAV
GLKTWPEHLSLPLANVNEAAMLDYTLRDKILYLADSGQSSVGLFKLKETSLVPRGQFLQL
KGDTVTALALDWITLNVYWSSTKQPRLQVTSSNGEHTAVLIHDMGSLESIALHPLSGRLC
FTNLAKQGEGAHVECAHMDGGKRVPVWKDAVQPTSLTFTNDGGEIYWADIGAGVIGSVRV
DGSGYNEFTTGDGLTAFALSNGMLLWVTDHDTTQVWYRDDQLIKTLWFEVNTKVVSLKAY
SKSSQMGFNFCSDGNGDCSHLCLAVPGGRTCRCAHGHRPVNATHCALDQHCPAGSRPCLD
GHTCLPLEKFCDGHPDCLDTSDENCVHLKGQSEVQSKAPTLLPSPSIPMSADPGSTTLDN
SGLVRNLDVKQQCSEKRCNGNGECVETNGGTSCACGLGYSGDSCQDQLANTMQGPLIYGA
VGLCAGIVVISVLVAVVRRKIANTRRAGPVVKQTSMTDLEKLGDSPSTQPSPDETNFSEE
VVSSVA
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggctttctatctgcttctgtgtatagcaattttggagatctcagttttgcgtgcagct
gtgcggactccattgaaatgcaacctgggcactaaaccctgcaaggatggctctgagtgt
attctctaccagcatgtgtgtgacggagaagtcgactgtagggatggctctgatgaggag
gactgcactgtcacatgcactaaaggacagtttctgtgtacccatgggaagaagtgcatt
gaccagaagcaggtgtgtgacggggtggcccagtgtcaggaccgttctgatgaggtggac
tgcctaaaggacatggagggctgtgctcaccactgtgacaacacaacccgctgcctccct
aaaaccttcctctgtgacggcgaggacgactgcctggacggcaccgacgaggccaactgt
gattcagactctgatggtcataaaaatcatcatgatgttgaagtttctgaaaatgaatcg
agcaactacaaagggtttaccaccatgtctgcaccagcacccctcaagtgtccttttggc
actaaaccatgtcaggacaagactgagtgtgttctttacagccatgtgtgtgatggagat
gcagattgtaaagatggctcagatgagcaaacctgttcattggaatgtgaaaatggtgag
tttcagtgtgcccatgggatgaagtgcattgaccagaggcaggtgtgtgacggggtggcc
cagtgtcaggaccgttctgatgagatgcactgtctgaagcccatggagggctgtgctcac
cactgtgacgacaagacccgctgcctccctgacaccttcctctgtgatggcgagagggac
tgcctggacggcaccgacgaggccaactgtgattcagactccactgatgatcataaaaat
catcgctattttgttgctgaagattatgacggcaacaacgaagggaatgccacctcaatg
tcggcaccagcacccctcaagtgtatttttggcactaaaccatgccagaacaatattgag
tgtgtgctttacagccatgtgtgtgatggagaggcagattgtaaagatggctccgatgag
gaagggtgttcattagaatgtggaagtggccagtttcagtgtgcccatgggaagaagtgc
gttgaccagaggcaggtgtgtgacggggtggcccagtgtcaggaccgttctgatgagatg
cactgcctgaagcccatggagggctgtggtcaccactgtgacgacaagacccgctgcctc
cctgacaccttcctctgtgatggcgagagggactgcctggacggcaccgacgaggccaac
tgcgctgatgagagctgcagcagtggggagttccgttgcaccagtggtcagtgtgcatct
ataagcatgcgctgcgacgggcatcctgactgttgggaccactctgacgaggagagctgc
accaagcccccccagtgcaccaccaaccgccgctgcccacacagccaggagtgtctgctg
gaggagtgggtctgtgatggggagcaggactgtaaagatggctctgatgaaaaggattgc
aagatgttccaattgaagtgtggggagttccagtgggcctgtacatcaaagagccaatgt
gttcccaaagcatggagatgtgatggaacaaaggactgtgctgacgaaagtgacgaggca
ggatgtggtcaggtggaaacatgcccatctcaccagttccagtgtgctagtatgtcagag
tgtttggacacagccctggtgtgtaacttggttaggaactgtgctgatggttctgatgag
ggtggtgactgcgaaaccaagtgtccagacaaagccctatgtgtccaaaactgctacagc
acaccacagggaacaaggtgtgggtgtaaggctggttaccagctcgacaaggatgcagtg
tcctgtggtgatattgatgagtgtgaaggtggtagacaagttgtttgcagccactcatgc
gtaaacactcagggctccttccactgtcactgcaaccctggttacctgctggaatctgat
ggccgccgctgcaagatcatgggtgagccgtatcttctggcctctgtgcagacagacctg
ttccttgttgggctgagaagcagtagtctggatgtcctggtgtcctctgctaagaaagcc
atcctgtctgtggactatgactggagggatcagagggtgttctgggtcagcctggattca
gagagcataaagtggtcctctctagaccaaaaaaaacgaggaacccttttcaaaggcatc
aaatctgactgcattgctgttgactgggtagggagaaacctgtactggattgatggcatt
ggaggtggtcggattattgctattggattaaactcaaccattacgagggctctggatctc
actgtcattcttgacaaggactttgaacaacctctctctctggcactcctgccacagaag
gggctcatgttctggtcagagattagtaacgaggtaaagattgagcgggcaggaatggat
gggtctgagaggagagtggtggtcagtcacagcctcagctggccaggcagtctggctgtg
gacccaataggggagcggctctactggacagacaagaagcttgggtgcattggctcagcc
accctggatggcggggacatcaagattctgcagttgacggagaccaccaacccgttctcg
gtcacagttttcaatgacctgctctactggtcagacaccaagaggggaactattcaaggg
gctaataaaatcactggaaagaaccgccaagttatactaaaacgacctgcacaacccttt
ggactcaaagtcattcatccactgctgcaaacaagcaccgatagtccctgtgagaaactt
cgttgctctcacctgtgtgtgttggcccctggccccaaaggggtttgcaagtgtccctct
ggtctgctcctagcggatgatggcctcaactgctccaacctggtcaactctgccttcctc
ttggtgttgtctccaactgttgtgacacagatatacctgcagaccatgctcagtgctgtg
ggcctgaagacctggcctgagcacctctccctacctcttgccaatgtcaatgaggcagcc
atgttggattacaccctacgagacaagatcctgtacctggctgactctggccagtcttct
gtaggcctcttcaagctgaaggagaccagcttggtgcctcgcggccagttcctgcaactt
aaaggggacactgtcacagccctggctctagactggataaccctcaacgtatactggagt
agcaccaaacagccacgcctgcaggtcacctcttccaatggggaacacactgctgtgtta
attcatgatatgggaagtctggagtccatagctcttcacccacttagtggaagactctgt
tttaccaacctggccaagcagggggaaggtgctcatgtggagtgtgctcacatggacggg
gggaagcgagttccggtttggaaggatgctgtgcagcccacctccctgactttcaccaat
gatggcggggagatttactgggctgacatcggtgctggggtgatcggctctgtcagagtt
gatggttctggatacaatgagtttacaactggggatggccttactgcatttgcgctcagc
aacggcatgctcctctgggtgacagaccatgacacgacccaagtttggtatagagatgac
caactgatcaagacactttggtttgaggtcaacactaaagtggtcagtttgaaggcctac
agcaagtccagccagatgggtttcaacttctgctcagatgggaatggagactgcagtcac
ttgtgtctggctgtccctggtggtaggacatgtaggtgtgcccatggccatcgaccagtc
aatgccacacactgtgccctagaccagcactgcccagctggtagtagaccctgtctggac
gggcacacatgcctccccctggagaagttctgtgatgggcatcctgactgccttgacacc
tcggatgagaattgtgtccatctcaaagggcagtctgaagtccagtctaaagctccaacc
ctgctgccaagccccagcattcccatgtctgcagatcctggctctaccactctggacaac
agtgggctggtgagaaacctggatgtcaagcagcagtgtagcgagaagcgctgtaatggg
aatggggagtgtgtggagaccaatgggggcacctcctgtgcctgtggtctaggctacagt
ggagactcctgccaagaccagctcgccaataccatgcaaggcccactaatctatggggct
gttggtctctgtgctgggattgtagttatcagtgtccttgttgctgtggtcaggaggaag
attgcaaacacaaggcgagccggccctgtggtaaagcagaccagtatgactgacttggag
aaacttggagattctccctctacacaaccttcacctgacgaaactaacttttcagaggaa
gtggtgtcatctgtggcgtaa
DBGET
integrated database retrieval system
