Salvelinus sp. IW2-2015 (Arctic char): 111957527
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Entry
111957527 CDS
T05762
Name
(RefSeq) claudin-4-like
KO
K06087
claudin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03272
Virion - Hepatitis viruses
salp04382
Cornified envelope formation
salp04514
Cell adhesion molecules
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
111957527
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111957527
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111957527
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111957527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111957527
04147 Exosome [BR:
salp04147
]
111957527
04515 Cell adhesion molecules [BR:
salp04515
]
111957527
Cilium and associated proteins [BR:
salp03037
]
Other cilia and associated proteins
Stereociliary proteins
111957527
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
111957527
Exosomal proteins of colorectal cancer cells
111957527
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
L1 family
111957527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
111957527
NCBI-ProteinID:
XP_023834149
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All DBs
Position
LG4p:complement(3560458..3595165)
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AA seq
216 aa
AA seq
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MAVEELGITLSMVGLAGTILICALPMWKVTAFIGTHLVVMQVFWEGLWMTCVSETTGQMQ
CKIYDALLDLFPDLQAARGLIVISMVLGCLAFLVFLLGARCTNCLSHPRVKACMVQAAGV
TFALAGLSTIVAVSWTAQSIIRDFYNPRVPEVLKKEMGAAIYVGWVTSGFLFCGGGVLCT
RCPPGGREGRHGSSNRYTLARMPTHTHSSYAIKNYV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggaggagctgggcatcaccttgtccatggtgggcctggcaggcaccatcctg
atctgcgccctgcccatgtggaaggtcacagcgttcatcggcacccacctggtggtcatg
caggtgttctgggagggcctgtggatgacctgtgtgtctgaaaccacgggacagatgcag
tgtaagatctacgacgctcttctagacctgttccctgacctccaggcggcccggggcctc
attgtcatcagcatggtactgggctgcctggcgttcctcgtcttcctcctgggggctagg
tgtaccaactgcctgagccatcccagggtcaaagcctgcatggtgcaggccgcaggggtc
accttcgccctggctgggttaagcaccatagtggctgtgtcctggacagcccagtctatc
attagggacttctataacccgcgggtccctgaggtgctgaagaaggagatgggggcggcc
atctatgtgggctgggtgacctctgggttcctgttctgtggaggaggggtgctgtgtacc
agatgtcctccaggggggagagagggcaggcatggttccagcaataggtacaccctggct
aggatgcccactcacactcacagcagctacgccataaagaactatgtgtga
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