Salvelinus sp. IW2-2015 (Arctic char): 111957580
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Entry
111957580 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 2-like
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp02010
ABC transporters
salp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111957580
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111957580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salp02000
]
111957580
Transporters [BR:
salp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111957580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
R1_ABCA1
AAA_21
ABC2_membrane_3
AAA_15
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
111957580
NCBI-ProteinID:
XP_023834205
LinkDB
All DBs
Position
LG33:complement(34282535..34360554)
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AA seq
2243 aa
AA seq
DB search
MYEVRTLFCFRMRHEAFYSAAPLTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLER
ISDVVLQNHLFTADRPGLGQELESLQQHLERLSTSTGPSPLDNGFNTSQDLTLVFNMIFG
LYPRAGEGSSHTSEGAEETAQTPAEKILQLEETLLGAMHSLDGGLIHKALRDPTKAAHRQ
XLLKLMSQALGLAGGGAGQSYDPQGLKEMEGVLLTGAMLEMLTCGEDGTGELSKILLVPE
KQQSMLQAYRSTVCGGAEGQRTEXFGEMSQELRDQIDTQSLIDKLRLEKVNSSAPLSRSH
LGALLKDLADVERLVRDVDLLSGLARLLPKGACAGGHTAPGAPANTTTSWARNATTWGPN
TTETPGEEGGEEEGGGREKEKGKENPHSQFSAFVQLWAGLQPILCGNDRIIEPEALKQGN
MSSLGFTSKEQRNLGLLVHLMTTNPKILYSPVGSQVDKVIQKANETFAFVGNVTHYARVW
LNISAQLRTYLEEGKLHHQLAWLQQLTSNLRGHPELLNGTDSDLLRGLMDGSYTLSNTST
LLEQLDTIDDAACGWTHFMSKVSVDIFKGFPDEDSIVNYTLNQAYHDNISVFASVIFQTN
RDGSLPPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFYFLYGFVWIQDMMERAIIN
TFVGHDVVEPGNYVQMFPYPCYTRDDFLFVXEHMMPLCMVISWVYSVAMMIQHIVAEKEH
RLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKXGRVLLHSDIFIIWLFLSIY
AIATIMFCFLVSVIYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASL
MSTTAFGLGSKYFALYEVSGVGMQWRTINQSPVEGDDFNLGLSMMMLIIDASVYGVLTWY
IEAVHPGMYGLPRPWYFPLQKSYWLGSGRVETWEWPWGGAARLSVMEEDQACAMEHRRSE
EMRGMEEEPSHLPLVVCIDKLTKVYKTGNKLALNKLSLNLHENQVVSFLGHNGAGKTTTM
SILTGLFPPTSGSATIYGHDIRTDMERIRQNLGMCPQHNVLFDKLSVEEHLWFYSKLKGM
AEEDIRKEMDKMIEDLELNNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVD
PYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKSTYGD
GYKLTLVKKQSESGDQVTQPPFFLSPCSSSSLSPSSSLSPSSLSPCSEARVTKFIRQFVG
SCLLVSDSNTELSYVLPSEAVKKGCFERLFQALEQNLDHLALTSFGVMDTTLEEVFLKVS
EEDQSLENSDADMKDSPGGSSVGKPAAAVVGLGAPGGPQGDGPGPGAPAGGSSSVLRPGV
ELSNLVNCSRLSQSQSSLRSSSSLGSVRGDEGGLYTDFYGDYCPLFDNGQDPDSTSLTAE
ADETSGPEQPVVLEGQGSVKLEGWWLRLRQFHGLIVKRFHCAKRNTKGLFSQILLPAFFV
CVAMTVALSVPSIGDLPPLVLSPSQYHNYTQPRGNFIPYANEDRPQYSSKLSPDASPQKI
ANTLRLPSGVGATCVLKTPFNSTLDQLAQTLNPSANNSKTLAARYFDSMCLDSFTQGVPL
SNFVPPPPSPAPSDDPDPRFEDRLWNFTAATLTTVRETVTSPPTLPLSIREPVRCICSMQ
GTGFSCPSGVGGRPPLMKVVTGDILVDITGRNVSEYLLYTSDRLRLHRYGGLTVGNIQKS
VPASFGKNNPPMVRKIAVRRSAQVLYNNKGYHSMPTYLNVLNNAILRANLPPGKGNPAAY
GITLTNHPMNRTSARLSLDYLMNRRVPVSSQPIEDDDEDVACERRRVLRREADNDMLKID
NLTKVYKSRKMGRILAVDRLCLGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGEAFI
GGSSILKELLRVQQSIGYCPQFDALFEDLTAREHLELYTRLRGIPWKDEERVVSWALEKL
ELSKYADKPAGTYSGGNKRKLSTAIALIGYPSLVFLDEPTTGMDPKARRFLWNLILDILK
TGRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKTSSSVK
EVVRFFNRNFPEAVLKESHHTKVQFQLKSERISLAQVFSKMEQVVEVLGIDDYSVSQTTL
DKVFVNFAKKQSDNLEQQESSPPGGGQSPLQRLLTLLRPRLANTELDALVSEEPEELESD
DDEGLISFEEERVQLSFNTDTLC
NT seq
6732 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggtgagaacgctgttctgttttaggatgcgccatgaagccttctacagcgca
gcacccctcacctcagcaggcatcattcccatcatgcagtctctgtgtcccgacggccag
agggacgagtttggcttcctgcagtacaagaactccactgtgacccagttgttggagcga
attagtgatgtggtgttacagaaccacctgttcacagcagacaggccaggactgggccag
gagctggagtccctgcaacaacacctggagagactcagcacgtccacagggccctccccg
ctggacaacggcttcaacaccagccaagatctgacactggtcttcaacatgatatttggc
ctgtaccccagagctggagaggggagtagtcatacttctgaaggggcagaagagaccgca
caaacccctgcagagaagatccttcaactggaggagacgcttctgggagccatgcatagt
ctggacggaggactgatccacaaagctttacgagacccaaccaaagcagcccatcggcag
ygcctactcaaactcatgtctcaggcattaggcctagcaggaggaggggcaggccagagc
tacgatccccagggactgaaggagatggagggtgttctcctgactggtgccatgttggaa
atgcttacttgtggggaggatgggactggtgagctgagcaagatcctattggttcctgag
aagcagcagtccatgctccaggcctatcgcagcacagtgtgtggtggcgctgagggacag
aggactgagcyctttggagagatgagccaggagctgagagaccagatagacacacagagc
ctcattgacaagctgcgtctggagaaggtcaactcctcggctcctctgtcccggtcccac
ctgggtgctctgctgaaagacctggcrgacgtggagaggcttgtcagggacgtagacctg
ctgtcaggcctggctcgcctgctccctaagggggcctgtgctgggggtcatacggcccct
ggggcccccgccaacaccaccacctcctgggcccgcaacgccactacctgggggcccaac
accactgagacccctggggaggagggaggagaggaggagggtggaggacgagagaaagag
aaagggaaagagaatcctcattcacagttttctgcttttgtacagctgtgggcagggctg
cagcctattctgtgtgggaacgataggatcattgagcctgaggctttgaagcaggggaat
atgagctctctgggtttcaccagtaaagagcagcgcaatctgggtttactagtgcatctg
atgactacaaatcccaagatcctctactctcccgttggctcacaggtggacaaagtcatt
cagaaggcaaatgagacatttgcgtttgtggggaacgtgactcactacgccagggtgtgg
ctcaacatctctgcccagctcaggacctacctggaggagggcaagctgcaccaccagctg
gcctggctgcagcagttgacctctaacctgcgtggtcacccggagctgctgaacgggacg
gacagtgacctgctgcgtgggctaatggatggcagctacaccctgtccaacacctccacc
ctgctggagcagctggacaccatcgacgacgcagcctgcggctggacacacttcatgtcc
aaggtcagtgtggatatcttcaagggtttccctgatgaagacagcatcgtcaactatacc
ctgaaccaagcctaccacgataacatctcagtgtttgccagtgtgatattccagaccaac
agggatggctccctgcctcctcatgtcctctataagatcagacagaactccagcttcaca
gagaaaaccaacgagatccgccgggcctactggcgcccggggcccaacacagggggaaag
ttctactttctctatggctttgtgtggatccaggatatgatggagagagccatcattaac
acgtttgtgggtcatgacgtggtggagcctgggaactatgttcagatgttcccctacccc
tgctacaccagagacgacttcctgtttgtgatrgagcacatgatgcctctgtgcatggtg
atctcctgggtgtactctgtagccatgatgatccaacacattgtggctgagaaggagcac
cggctcaaagaggtgatgaagatgatgggcctgaacaatgcggtccactgggtggcctgg
ttcatcactggcttcgtccagctgtccatctccgtgaccgccctgacggccatcttgaag
targgcagagtgctcctccacagtgacatcttcatcatctggctcttcctctccatctac
gccatcgcaacgatcatgttctgtttcctggtgtccgtgatctactccaaggccaagctg
gcgtctgcctgtggcgggataatctacttcctaagctacgtcccctacatgtacgtggcc
atcagggaggaggtggcccatgacaagatcaccgcctttgagaagtgcattgcttctctg
atgtcgaccacagcgttcggcctgggctctaagtactttgccctgtatgaggtgtcagga
gttggcatgcagtggcgcaccatcaaccagtcgcctgtagagggcgatgactttaacctt
ggtctgtccatgatgatgctcatcatcgatgccagtgtgtatggagtactcacctggtac
atagaagctgtgcatccagggatgtatgggctgccccggccgtggtacttccccctgcag
aagtcctattggctgggcagtgggcgtgtggagacgtgggagtggccttggggaggagca
gccaggctgagtgtcatggaagaggaccaggcgtgtgccatggaacaccggcgatctgag
gagatgcgtggtatggaagaggagcccagccacctgcccctggtggtgtgtatagacaag
ctgaccaaggtgtacaagacgggcaataagctggctctcaacaagctgagcctcaacctt
catgagaaccaggtggtttccttcctgggccacaacggagccggcaagacaaccaccatg
tctattctgacaggtctgttcccgcccacctcgggctcagccaccatctacggccatgac
atccgtactgacatggagcggatcaggcagaacctgggcatgtgtccgcagcacaacgtg
ctctttgacaagctcagcgtggaggagcacctgtggttctactccaaactcaaaggcatg
gccgaggaggacatccgcaaggagatggacaagatgatcgaggatctggagctgaataat
aaacggcacagcctggtgcagactctgtctggaggaatgaaacggaaactgtccgtagcc
atagcgtttgtgggcggctcccgggcagtcatcctggatgagcccacggcgggggtagac
ccttacgcacgcagagccatctgggacctcatcctcaagtacaaacagggccgcaccatc
ctgctgtccacccaccacatggatgaggctgacctgttaggagaccgcatagccatcatc
tcccatggaaaactcaagtgctgcggctccccactctttctcaagagcacctacggagac
ggctacaaactcaccctggtcaagaaacagagtgagagcggcgaccaggtcacccagcct
ccattcttcctgtctccctgctcctcctcctccctgtctccctcctcctccctgtccccc
tcctccctgtctccctgctcggaggctcgggtcaccaagttcatccgtcagttcgtgggg
tcctgcctgctggtgtctgactctaacactgagctgtcctacgtgctgccttcggaggct
gtcaagaagggatgcttcgagaggctctttcaggcgttagagcagaatctggaccacctg
gctctgaccagcttcggggtgatggacaccactctggaggaggtcttcctcaaggtgtca
gaggaggaccagtccctggagaacagtgatgctgacatgaaggattccccgggcggtagc
tcagtggggaagcctgctgctgcggtggtgggtctgggggcccctggagggccgcagggt
gatggcccggggccgggggctcctgcaggaggcagcagcagtgtactgagaccaggggta
gagctcagtaacctggtaaactgctccaggctcagccagagtcagtcgtccctgcgctcc
tcctcctccctggggtccgtgcggggggacgagggggggctctacacagacttctacgga
gactactgccccctcttcgacaacggacaagaccctgactctaccagcctgacggcggaa
gcggatgagacctctggccctgagcagcctgtggttctggagggccagggcagcgtcaag
ctggaggggtggtggctgaggctacgtcagttccatggcctcatcgtgaagaggttccac
tgtgccaagaggaacaccaagggtcttttctctcagatcctgctgcctgcgttcttcgtc
tgtgtggccatgaccgtagccctgtcggtgccttccatcggagatctgccaccattggtc
ttgtctccatcacagtaccacaactacacccagcctcgtggcaacttcatcccctacgcc
aacgaagaccgcccacagtacagcagtaaactgtccccagacgccagccctcagaagatc
gccaacacgctccgtctgccttctggtgtgggcgccacctgcgtcctcaaaacgcccttc
aacagcaccctggaccagctggcacagacgctcaaccccagcgccaacaactccaaaacc
ttagctgcccgctactttgactccatgtgtctggattccttcacccagggagtgcccctg
tccaacttcgtaccccctcccccctcgccagccccctcagatgaccccgaccctcgcttt
gaggatagactgtggaacttcactgctgccactcttaccactgtccgggaaacagtgacc
tctccccccaccttgcctctgtctatccgggagccggttcgttgtatctgctccatgcag
gggacgggcttctcctgccccagcggggtgggggggcggccgccccttatgaaggtggtc
actggggacattctggtggacatcaccgggcgcaacgtgtcagagtacctcctctacacc
tctgacagactgcgcctgcacagatatggaggactcactgtaggcaacatacagaaatca
gtcccagcatcctttgggaaaaataatccgcccatggttcgcaaaatagccgtgcgcaga
tcagctcaggtgctatacaataataaagggtaccacagcatgccaacctatctcaatgtc
ctcaacaacgccatcctgcgcgccaacctgcctccaggcaagggcaaccctgctgcatac
ggaatcaccctgaccaaccaccctatgaaccggaccagtgcaaggctctctttggactac
cttatgaacaggagagtaccagtcagcagccagcccatagaggacgatgatgaggatgtg
gcctgtgagagaaggagagtactgagacgagaagctgacaacgacatgctgaagattgac
aacctcaccaaggtgtacaaatcgaggaagatggggcgtatcttggctgtggaccggcta
tgtttgggcgtgcgtcctggggagtgtttcggcctcctgggtgtgaacggagcagggaag
accaccaccttcaagatgctgactggagacgagagcaccacgggaggagaggccttcata
ggggggagcagtatcctgaaggagctgttgagggtgcagcagagcattggctactgtcct
cagtttgacgccctgtttgaagatctgacagccagagagcacctggagctgtacacacgc
ctccggggcatcccctggaaggacgaggaaagggtggtctcatgggccctggagaaactg
gagctgtccaagtatgcagacaagcccgctggcacctacagtgggggaaacaagcgcaag
ctgtccactgccatcgccctcatcggatacccctctctcgtattcctggatgaacccact
acagggatggatcctaaggcccgcagattcctctggaacctcatcctcgacatcctcaag
acgggacgctctgtggtgctgacatcacacagtatggaggagtgtgaggctctgtgcacc
agactgggcatcatggtcaacggcaggttcaaatgcctgggtagcatccagcacctcaag
aacaggtttggtgatggttacatgatcacagttcggaccaagaccagctccagtgtgaag
gaggtggtgagattcttcaacaggaatttccctgaggctgtactaaaggagagccaccac
actaaggtccagttccagctgaagtcagagaggatctccctggcccaggtgttcagtaag
atggagcaggtggtggaggtgctggggatagatgactactctgtcagccagaccacactg
gacaargtatttgtgaactttgcgaagaagcagagcgacaacctggagcagcaggagagt
tccccccctggtggaggccagtcgccactgcaacgcctgctaaccctgctcaggccccgg
ctggccaacacggagctcgacgccctggtcagcgaagaaccggaggaactagagagtgat
gacgatgagggcctcatcagcttcgaggaggagagggtgcagctctcctttaacacagat
acactctgttga
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integrated database retrieval system
