Salvelinus sp. IW2-2015 (Arctic char): 111957607
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Entry
111957607 CDS
T05762
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
salp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111957607 (gle1)
03015 mRNA surveillance pathway
111957607 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111957607 (gle1)
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111957607 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
111957607
NCBI-ProteinID:
XP_023834241
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All DBs
Position
LG33:12160175..12167798
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AA seq
723 aa
AA seq
DB search
MPAESLRWDTLEALKSSPKGRLKYNPDWLEKGEDILSGCNEAPSLSPLSGLILKRLNMSP
RALQKTCSLGSASRDPSPGLSEEAPVSSTSPFPSANAQPTPLSSPLLVPRLKKDTEQQIV
GDEDSAPDTSDDLSPVTNPIPPPTISLLSPRATQMEGCIRICEEKHRAKAKMELSLRQEL
QEKLVASVASRESEQLKRFEELMELKQRQEYQSMRDMMDRETQESIGRQEKLKEEHKNRI
KILNLRLREAEQQRLREAEFERQRQVEGRERLRALNAIQEEILQLNQLLEPAAPTQSGPS
PDLTSYSTRANQLCSQVSEVVRMTAEGEFPSVEDMTVAERALHEMRSLIRVMQEAAAQAQ
EKRKKEQEEEEERRKMAVLQAQQEEQKKSAALSAKEKARKKGLQTKAEQSTLKWYQELQD
SANQCAQSFEGLNNTKDIQTKKLRMELQKAATIPVSQISSISGSKLREIFDKIDKLLSGR
SVVSGGKSVSTSQHPNGLDFVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWELHPK
VGDLILAHLHKKCPYAVPHYPPMKDGTSVEEYQKILGYRVEDGGVEAQDSFLKRMSGMIR
LYAAIIQLRWPNGSKQGPAPHGLNNGWRWLAQMLNMEPLADVTATLLFDFLEVCGNALMT
QYQVQFWKLILLIQEEYLPRIEAVTSQGQAGSVTRLKQFLESSLRSRQIPPPKGQLSSHF
WRS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaaagtttacgatgggatacattggaggccttgaaaagctcaccaaaggga
agactgaaatacaacccagactggctcgaaaagggggaggatattttgtcaggttgtaat
gaagctcctagcttgtccccactctctgggctcatcttgaagaggcttaacatgagccct
cgagcgcttcagaagacctgctctttgggctctgcttcccgtgacccaagcccaggcctg
tctgaggaggccccagtctcctcaaccagccccttcccttcagccaatgctcagcccact
cccctctcttctccactactggtccccaggttgaagaaagacacagagcagcagattgtt
ggtgatgaggacagtgccccagataccagcgacgatctcagtccagtcaccaaccccatt
cctccccccaccatctccctgctgtctcccagggcaactcaaatggaaggatgtatacgc
atttgtgaggagaaacatcgtgccaaagctaagatggagctgagtctgaggcaggagctg
caggagaagctggtggcctcagttgcgagccgtgagtcggagcagctcaaacgctttgag
gagttgatggagctgaagcagagacaggagtaccagagtatgcgggacatgatggacaga
gaaacacaagaaagcattgggcgccaagaaaagttgaaagaagagcacaaaaacagaata
aagatcctgaacctgcgcctgcgggaagcggagcaacagcgtttgcgggaggcggaattt
gagaggcagagacaggtggagggtagggagagactgcgtgctctcaacgccatccaggaa
gagatacttcaactcaatcagctcctggagccggccgcacccacccagtcaggcccctcc
cctgatctcacatcctatagcacccgtgccaaccagctatgctcccaggtgtcagaggtg
gtgcgcatgacagcagagggggagttccccagtgtggaggacatgacggtggcagagcgg
gcactgcatgagatgaggtcactgatccgggtgatgcaggaggcagctgcccaggcccag
gagaagaggaagaaggagcaggaggaggaagaggagcgcaggaagatggcagtgctgcag
gcccagcaggaagagcagaagaagagtgcagctctgtcagccaaagagaaggcacggaaa
aagggcctgcagactaaagccgagcagagcactctgaagtggtaccaagagctgcaggac
tccgctaaccagtgtgcacagtcttttgaaggcttgaacaacactaaggatatccagaca
aagaaactaagaatggagctccagaaggcagccacaatccctgtcagccagatctccagt
atctcgggttccaagctcagggaaatatttgacaagattgacaagctgttgtctgggaga
tcagtggtatccggagggaagtctgtctccacctcccagcatcccaacggcctggacttt
gtcagctacaaactggccgagaagtttgtgaaacaaggagaagaggaggtggcgtcccac
cacgaggcagccttccccatcgctgtggtggcctccggggtgtgggagcttcaccccaaa
gtcggagacctcatcctcgcccaccttcataagaaatgcccctacgccgtgccccactac
ccacctatgaaggatggcacatctgtagaggaatatcagaaaatcttaggctaccgtgtg
gaagatggaggggtggaggctcaggacagctttttgaagaggatgtcaggaatgatccgc
ctctatgctgctatcatacagctccgatggcctaatggctccaagcaggggcctgcccca
catgggctgaacaacggctggcgctggctggctcagatgctgaacatggagcccctggca
gacgttacggcaacactcctttttgacttcctagaggtctgtggcaatgccctgatgacg
cagtatcaggttcagttttggaagctcattctgctcatccaagaggaatacttgccaagg
attgaagctgtcaccagccaagggcaggcgggctcagtcacgaggctcaagcagttcctg
gagagttcattaagaagcaggcagatccctccccccaaaggccagctgagctcccacttc
tggagatcctga
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