Salvelinus sp. IW2-2015 (Arctic char): 111957652
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Entry
111957652 CDS
T05762
Name
(RefSeq) nodal homolog
KO
K04666
nodal
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04060
Cytokine-cytokine receptor interaction
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111957652
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111957652
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111957652
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Transforming growth factors (RSTK binding)
111957652
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
111957652
NCBI-ProteinID:
XP_023834326
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All DBs
Position
LG33:complement(20771851..20774847)
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AA seq
420 aa
AA seq
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MEGLAWLVLCALLICFFRLGSSGKLSHHSRHHKSAPESSLGNLNSYHPNRYPLYMMQLYR
SFKAADSSQSTAVNAVSAADDSHLLRHSDSVISLIAKGCHQVGEKWTVTFDMSSISATDD
VQLSELRVRLPAFSASKRVTLDIYHSRKQDCESDTEMCRDERLLLGSFGASPSDTKSPLN
VFNVTALLKYWLHQGDAVTESQEARVGDVMEEDHGSGVDGEIDMPYIKHFTHRRRKVHHP
TAERVMMVVFSKHNLPRDGESAPTLIRTVEHSKYAILDQVSGEAQGRRHKRNRMERVRMA
GGIAANGTGSLAESVQRPLCRKVDMWVDFDQIGWNEWIVYPKRYNAFRCEGECPTPVDES
FSPTNHAYMKSLLRLYHPDRVGCTSCVPTRLSPLSMLYYGDEDVVLRHHEDMIVEECGCH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcttggcatggctcgtcctttgcgcgctcctcatctgctttttcaggcttggc
agttcggggaaactgtcgcaccattcccggcatcacaagagcgcacccgagtccagttta
ggaaatctaaattcgtaccatcccaacaggtaccctctctatatgatgcagctgtaccgc
tccttcaaggctgcagactcctcacagtccacggctgtcaacgccgtcagtgcagccgat
gacagccacttactgcggcattctgactcagtcatcagtctcatagcaaaaggttgccat
caagtgggtgagaaatggaccgtcactttcgacatgtcctccatctctgcgactgacgat
gtccagttgtcagagcttcgggtcagactaccagctttctccgcctccaagcgcgtcaca
ttggacatttatcactcgcgaaagcaggactgcgagtctgacactgaaatgtgccgcgac
gagcgccttctcttgggcagctttggcgcatcgcccagtgacaccaagtctccattgaac
gttttcaatgtaacagctctgctcaaatattggttgcaccagggagacgcagtgacggag
agtcaagaagcaagagttggagatgtgatggaggaagatcacgggagtggggtagatgga
gagatcgacatgccatacattaagcattttacgcacaggcgaaggaaggttcaccatccg
acagccgaacgggttatgatggttgtcttctccaagcacaacctgcctcgggatggcgag
agcgcacccactctcatccgtactgtggagcactccaaatacgcaattttggaccaagtc
agcggtgaagctcaagggcgacgccacaagagaaaccgaatggagagagtgcggatggcc
ggcggaattgcagcgaatggtactgggtcactggctgaatccgtccaacgcccactatgt
cggaaggtggacatgtgggtagatttcgaccagatcggctggaacgagtggattgtgtat
ccaaagcgctacaacgcgttccgttgcgagggcgagtgccctactccggtggatgaatcc
ttcagtcccaccaaccacgcatacatgaagagcctgttgagactgtaccatccggatcgt
gtggggtgcacctcctgcgtgcctacgcgcctcagcccgctgtccatgctgtactatggt
gatgaagacgtggtgttacggcatcatgaggacatgatcgtggaggagtgtggctgtcac
tga
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