Salvelinus sp. IW2-2015 (Arctic char): 111957674
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Entry
111957674 CDS
T05762
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111957674
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
111957674
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GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
111957674
NCBI-ProteinID:
XP_023834364
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Position
LG33:13075324..13082597
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AA seq
558 aa
AA seq
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MEGEERKGEAGPGPGRLSALQEQLIWALLGSGLSREVLVHALGELERERVTPGAEKGDRG
DGESSEEGEMDFPPPIFQELEALAPEEAARQRALVDQLLQEDPWRVAKLVKSYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYVRKQGEISQQFTNARHALGSGED
QGEDVRKGRRNRFKWGPASQQILFHAYERQRNPSKEEREGLVEECNRAECLQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDMPYNSQSASSTNHTLSHSPEQGMKYSQ
QITCDNLGSSRGHNGDRGLGGRLASPIQLEPSHTLLETHHHKPVSGGGPLPPVSTLTSLH
SLSASPAPHHGLIMTSLPSVMSLGESSLLIGQTVPVINNVGGGFTTLQPISFQQQLHSTS
QQQLTQQFQSHMTHHSPFMATMAQLPCHMYSKSDMSHYPPSSLLSQAMVITDSSSLGTLT
SLTTVRQILTTDPEEQTDQPIQEDSLHLQSPSPVPVSSGNLQLYPPSQSSETHPPHRLSS
SPADINSYIPAQMVSTAQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaggagaggaaaggagaagcagggcccggccctgggcgtctgtctgctctc
caggagcagctgatctgggctctgctgggctctggactgtcccgggaggtcctggtccat
gccctgggagaactggagcgagagagggtcacccctggagcagagaagggggacaggggg
gatggcgagagttcggaggagggagaaatggattttccaccccccatattccaggagctg
gaggccctagccccagaggaggcagccaggcagagggctctggtcgaccaactgcttcag
gaggatccatggcgcgtggcaaaactggtgaagagctacatgcagcagcataacctcccc
cagagagaggtggtcgagtccacaggcctcaaccagtcccatctctcccagcacctcaac
aaaggcacgcccatgaagaaccagaaacgggctgctttgtacagctggtacgtcaggaag
cagggcgagattagccagcagtttactaatgccaggcatgcccttgggtctggagaggat
cagggagaggatgtgaggaagggacgtaggaacaggttcaaatggggacccgcctcccag
caaatcctcttccacgcctatgaacgacagaggaacccaagcaaagaggagagagaggga
ttagtggaggagtgtaacagggctgagtgtctccagaggggtgtgtctccgtcccagctg
gctggcctgggctctaacctggtgacagaggtacgagtgtacaactggttcgctaaccgc
cgcaaggaggaggccttccgccataaactggctcttgatatgccttacaacagccaatca
gcaagctccaccaaccacacgctctcacacagccctgagcaaggcatgaagtatagccag
caaatcacatgtgacaatctggggtcatcgaggggtcacaatggagacagaggcttgggg
ggccgcctggccagccccattcaactggagcccagccacacactcctggaaacacaccat
cacaaaccagtatcaggtggtggccccttgcccccagtcagcaccctgacatcactgcac
agtctgtctgcctcgcctgctccccaccatggactcatcatgacctccctgcccagcgtc
atgagtctgggagagtcctctctcctcataggtcaaaccgtacctgtcatcaacaacgtg
ggaggcgggttcaccacccttcagccaatctctttccagcagcagcttcattccacttcc
cagcagcaactcacacagcagttccagagtcatatgacccaccacagtcctttcatggca
accatggcacagcttccatgtcacatgtacagcaagtctgatatgtcccactaccctcca
tccagcctactgtcccaagcaatggtcatcactgacagcagcagccttggaacactgacc
agtctaaccacagtcaggcagattctgaccacagaccctgaggagcagacagatcaaccc
atccaggaggactccctacacctgcagtccccttcacctgtgccagtttcctctgggaat
ttacagctgtatcctccatctcagtctagtgaaactcatccacctcaccgcctctcctct
tcgccagcagacatcaactcctacattcctgcacagatggtctctaccgcacagtag
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