Salvelinus sp. IW2-2015 (Arctic char): 111957775
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Entry
111957775 CDS
T05762
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111957775
Membrane trafficking [BR:
salp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111957775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
111957775
NCBI-ProteinID:
XP_023834530
LinkDB
All DBs
Position
LG33:complement(15818502..15862186)
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AA seq
1450 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNGDVLKTAERLYRAAWITKQQRINLDRLIL
TSAEASPAECCQHAKVLEDTQFLDGYKTLGFQESIYGEFLGRVRENPRLLASCLVAGERL
NQEHTQGVIYTVFTSLYGNCIMQEDERYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVTERFTPAQQERLFGEKGS
EGYRQKVAAAVEANEAKLVTLVNKFIGYLKQNTYCFPHNLRWIVSQMYKTLSCVERLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDGDP
RRKKSLAKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTVAYMTHSQLLCLVDFV
RSVMAGDHLREEEHMLLETMLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRNIA
ASRSRSRSELAQQGEAEASSLESLQEVMPEEVLVISLGSSPQTIPGMMSENEVLTMQLTD
GSQGDIPADDTKHHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAG
PSGSNGVEALQLLEHEHATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGS
DFDPNMDEDRLQEIAGATVENMLGSLLCLPGSSSVLLDPYGSTISETTSEAWSVEVLPSD
SEAPDLKQEERLQELESCSGLGSTSDDTEVREVSSRPSTPGLSVISATSEDRGKTEDLRS
ECSSDFGGKDSVTSPDGEESSHGAHHSLASPASQADSLLAMFDPLSSGEGFSTGTIVRPK
VHYARPLHPPPDPPIPEACALGQEPRYSLFTPHCLAQAELEHTKQRHSYPDRLVRSRSSD
IVCQGRRPTSDPGLNRRAAAEERDPAGHFSMGPSSSPSKDSLKGEVEERKDSDEEKSDRN
RPWWKKRFQSAIPKVLYWTAESEVPAPIAFRKRDRQEKDDVGHERVPQDDTLSRNSQAQA
AEDILDKYRNIKRTSPSEGATAAAYDTTGELCGEEGLHDEALQNMSTDDLPDSASQTAQQ
HDSSKFSFSDAKKKLRLALCSADSVAFPLMAPATTRNGLPDHTDSEDNEIVCFLKVQLAE
AINLQDKNQMAQIQETTRCVSRFDARTCRKLLAAIAEDYRKRAPYIAYLTRCRQGLQTSQ
AHLERLLQRVLRDKEVANRYFTTVCVRLLLEHMEAKSLDFIKAFQGCTASDDKTAAVEDF
LRYLYGAMAHDAIWQYASEDQLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQLLQEHI
ARLSKVVTANHKALQIPEVYAREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLL
SLANEDSVPGADDFVPVLVFVLIKANPPCLLSTIQYINNFYASRLSGEECYWWMQFTAAV
EFIKTIDDRK
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctgtatgtg
gcttcagagaagcagctgatccagcggctcaacggggacgtgctgaagactgctgagaga
ctgtaccgtgctgcctggatcaccaaacagcagaggatcaatctcgacaggctcattctc
accagtgctgaggcctccccggccgaatgctgccagcatgccaaagtgctggaggacaca
cagttcctggacggctacaagactctgggctttcaggagagcatctatggggagttcctg
ggtcgggtgcgcgagaaccctcggctgttggcctcctgcctggtggctggggagaggctg
aaccaggagcacacacagggggtcatttacacggtcttcacctcactctacggcaactgt
atcatgcaggaggatgagcgctacctgctgcaggtcctccgctacttggtggagtttgag
ctgaaggagagcgacaaccctcggcggctgctgcggcggggcacgtgcgccttcagcatc
ctcttcaagctcttctccgaggggctgtactcggccaagcttttcctcaccgccaccctc
cacgagcccatcatgcagctgctggtggaggacgaggaccacctggagacggatccctcc
aaggtgacggagcgcttcacgccggcccagcaggagcgcctgtttggggagaagggctcg
gagggctacagacagaaggtggcagccgccgtggaagccaacgaggccaagttggtgacc
ctggtcaacaagttcatcggctacctgaagcagaacacctactgcttcccccacaacctg
cgctggatagtgtctcagatgtacaagacactgtcgtgcgtggaacggctggaggtgggc
gaggtgcggaccatgtgcacggacctgctgctcacctgcttcatctgcccagccatagtc
aaccctgagcagtacggcatcatctcagacgcccctatcaatgaggtggctcgcttcaac
ctcatgcaggtagggcagcttcttcaacagttggcaatggctgacgatgatggagacccc
cggaggaaaaagagtttggccaagttcgataagagctgtgtagctgccttcttggatgtg
gtaatcggagggagagctgtggagacaccgcccatgtcctccatgaacctactagaagga
ctcagcaggactgtggcgtacatgacacacagtcagctcctctgcctggtggactttgta
cggagtgtgatggcaggggaccacctccgggaggaggagcacatgctcctggagaccatg
ctggccaacgtgccccagtcccgcacggtgaagagcaacagtctggagctcaccccctcc
aacaccccccagctctccccagccaccacccccgccaacaaaaaaaacaggaacatagca
gcctcccgcagtcgtagccgttccgagctggcccagcagggggaggcagaggctagctct
ctggagtccctgcaggaggttatgccagaggaggtgctggtgatctcactaggaagcagc
ccgcagaccatccctgggatgatgtcagagaatgaggtgttgaccatgcagctgactgat
gggtcacaaggggacattcctgcagatgacaccaagcaccatggcaagccagacaaaacc
ctgcgcttctccctctgcagtgacaacctggagggcatctcagagggtccatctaaccgg
tctaactctgtgtcgtctctggacctggagggagagtctgtgtctgagctgggagctggg
ccatcagggagcaatggggtggaggctctacaactgctggagcatgaacatgccaccact
caggacaacctggatgacaaactgcgtaagtttgagatccgcgacatgatgggcctgaca
gatgaccgggacatctctgagacagtgagtgagacctggagcacagacgtgctgggcagc
gactttgaccccaacatggatgaggatcgactgcaggaaatagctggggcgactgtagag
aacatgctgggcagcctgctgtgcctaccaggctccagctcagtgctgctagacccttat
ggatccaccatctcagagaccaccagcgaggcctggagtgtggaggtcctgcccagcgac
tcagaagccccagacctgaagcaggaagagcgtctacaggagttggagagctgctcaggg
ctgggcagcacctccgatgacacagaggtcagagaggtcagctcccggcccagcacccca
gggctcagcgtcatctcagcgacatcagaagatagaggcaagacggaggacctgcggtcg
gagtgcagctcggactttggggggaaggactctgtgaccagtccagatggggaggagtcg
tcccacggagcacaccacagtttggcttctccggcctcgcaggcagactccttactggcc
atgttcgatcccctatcctccggggaaggtttctctactggtaccatcgtgaggcccaaa
gtgcactacgccaggccccttcatcctccccctgaccctcccatcccagaggcctgtgcc
ctgggccaggagccccgctactccctgttcacgccccactgcctggcccaagctgagctg
gagcacaccaagcaacgccactcctacccagacaggctggtacgcagccgcagctctgac
attgtttgccaaggccgccggcctaccagcgacccgggcctcaaccgcagagcggcagcc
gaggagcgggaccctgccgggcacttctccatggggccgtcctcgtcccccagcaaggat
tccctaaaaggagaggttgaggagagaaaggacagtgatgaggaaaagtctgatcgcaac
agaccatggtggaagaaacgttttcagtcagccattcccaaagtgctgtattggacggct
gagagtgaagtcccagctccgatagccttccggaaaagggacaggcaggagaaagacgat
gtgggccatgaacgcgtcccacaagacgacactctgtccaggaactcccaggcccaggca
gcagaagacatcctggacaaatacaggaacatcaagaggaccagccctagtgaaggagcc
accgctgcagcctatgacaccacaggagagctgtgtggagaggagggtttacacgacgaa
gctctgcagaacatgtccacagacgacctgccagactcagccagccagacagcccagcaa
cacgactccagcaagttctcattcagtgatgcaaagaagaagttgagactggccttgtgt
tcagcagactctgtggctttccccctcatggctcctgccaccacacgcaatgggctgcct
gaccacacggactctgaagacaatgagatcgtgtgcttcctgaaggtccagctggcggag
gccatcaacctgcaggataagaaccagatggcccagatccaggagaccactcgctgcgtc
agccgcttcgacgcacgtacctgcaggaagctgctggcagccatcgccgaggattacagg
aagcgggcgccctacatagcgtatctgacgcggtgtcggcaaggcctgcagacgtcccag
gcccacctggagcggctgctgcagcgggtgctgagggacaaagaggtggctaaccgctac
ttcaccacagtctgtgttcgcctcctactggaacacatggaggcgaagtccctggacttc
atcaaagccttccaggggtgcacagcgtcagatgacaagacggcggcagtggaggacttc
ctgcgctacctgtacggggccatggcccatgatgccatctggcagtacgccagcgaggac
cagctgcaggatgcccagatggccatagagcgcagcgtcatgaaccgcatcttcaagctg
gccttctaccccaaccaggacggggacatcctgagagaccagcttcttcaggaacacata
gcgcgtctctcaaaagtggtgacggcaaatcacaaagctcttcaaatcccagaggtgtat
gcgagggaggctccctggccgtctgcccagtcggagatccggaccatcagtgcctacaag
actcctcgggacaaagtgcagtgtatactgcgcatgtgttccaccatcatgaacctcctg
agtctggccaacgaggactctgtccctggagctgacgacttcgtccctgtgcttgtcttt
gtcctgataaaggcaaacccgccctgcctgctgtccactattcagtacatcaataatttc
tacgccagccggctgagtggggaggagtgctattggtggatgcagttcaccgcggcagtg
gaattcattaagaccatcgatgatcgcaagtga
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