Salvelinus sp. IW2-2015 (Arctic char): 111957822
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Entry
111957822 CDS
T05762
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111957822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111957822
Ion channels [BR:
salp04040
]
Ligand-gated channels
Serotonin (5-HT3)
111957822
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
MamF_MmsF
Motif
Other DBs
NCBI-GeneID:
111957822
NCBI-ProteinID:
XP_023835010
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Position
LG1:10331834..10358491
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AA seq
416 aa
AA seq
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MSQSFASFKVQSHLRVCMKCVSVPLGTVSPERVCSYQDVLDHLNLTRGNDVFTSTRPVLD
HTHPTMVHLDVYLYAILAVTWNNERIWWDPSQFCGISRVSVPKEMLWIPDLTIYEMTEKD
DGPHSPYLYVSHDGIVLIEDEMKVVSTCKMDVHKFPFDTQRCNITFSSAIHIVTDIQLIP
FSNSSRVTQASREVMQTQGEWEFLDMTVSRGKLILDREWDQISYTITMARRPLLHVINFL
LPILFFLCLDLASFLISDQRGEKLGFKVTVLLAISVLLLILNDILPSMSNRTPLIATYCI
VIFAFMLLSLLETILVTHLMERDSVHQETGIDHAPAYDCDPEEVICSEQGESHLLLLILG
ELRAVERTLALFASGRREGKPGYWTRVARRLNAAFFTIYLISVMLFISLMCKEWLN
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtcattcgcctcgttcaaggtacagtctcacctgagagtgtgtatgaagtgt
gtgtctgtccctctaggtacggtgtcacctgagagggtgtgtagttatcaggatgttctg
gaccacctgaacctgaccagaggaaacgatgtgttcacctccacgcggcccgtgctcgac
cacacacacccaaccatggtgcacttggatgtctacctatacgctatcctcgccgtgacc
tggaataatgagcggatctggtgggatcctagtcaattctgtggaatatccagggtctcc
gttcccaaagagatgttgtggataccagacctcacaatctacgagatgacagagaaggat
gatggccctcacagcccatacctgtatgtgtcccatgatgggatcgtcttaatagaggat
gaaatgaaggtggtcagcacctgtaagatggacgtccacaagtttccatttgacacacag
agatgtaacatcacattcagctccgccatacacatcgtgacagatatacagctcattcct
ttctctaactcgtcccgggtcacccaggcttctcgtgaagtcatgcagacgcagggagag
tgggagttcctggacatgactgtctccaggggcaaactaatcttagatcgcgagtgggac
cagatctcatacactatcaccatggcgaggaggcccctcctccacgtcatcaatttcctg
cttcccatcctgttcttcctgtgtctggacctggcctccttcctgatctcagaccagcgg
ggggagaaactgggctttaaggtcaccgtgctgctggccatctctgttttgctgctcatc
ctcaatgacatactgccctccatgtcaaacaggacccctctcatagcgacctactgtata
gtgatctttgccttcatgttgctaagcctgttggagaccatcttagtgactcacctgatg
gagagagactctgtacaccaagagacaggtatagaccacgcccccgcatatgactgtgac
ccagaagaggtcatctgtagcgagcaaggagagtctcacctgttgctgttgattctgggg
gaactacgggcggttgagcggacattagcgctgttcgccagtggcaggagggaggggaaa
cctgggtattggaccagagtggcacggcgcctcaatgccgccttcttcaccatctacctc
atctctgtcatgctcttcataagccttatgtgtaaggagtggttaaattag
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