Salvelinus sp. IW2-2015 (Arctic char): 111957852
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Entry
111957852 CDS
T05762
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03030
DNA replication
salp03410
Base excision repair
salp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111957852 (pole)
03410 Base excision repair
111957852 (pole)
03420 Nucleotide excision repair
111957852 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salp03032
]
111957852 (pole)
03400 DNA repair and recombination proteins [BR:
salp03400
]
111957852 (pole)
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111957852 (pole)
DNA replication proteins [BR:
salp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
111957852 (pole)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
111957852 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
111957852
NCBI-ProteinID:
XP_023834659
LinkDB
All DBs
Position
LG33:complement(7824773..7851743)
Genome browser
AA seq
2291 aa
AA seq
DB search
MVLQNSGRYKSERGQGGDQDNQQDDRSSMSAAIRLERSQFTDEMDTRFGFERMKDPGEKT
GWLINMHPTEILDDDKRMVSAVDYYFIQEDGSRFKVPLPFKPYFYIATKKNCEREVISFL
SKKFQGKVAKLEMLPKEDLDLPNHLVGLKRSYIKLSFNTVDDLMKVKREISPAVRKNRER
EKSNDTYTSMLSSALAGGSVSAADEDGMSKKTSDQMDNIVDMREYDVPYHMRLSIDLKIH
VAHWYNVRYRGSAYPPEIILRNDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEAGLIQRWFEHVQETKPEIF
VTYNGDFFDWPFVETRAAHHGLNMYREIGFQKDNQGEYRASQAIHMDAFRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEESQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIVFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEETLRHAIEEEEKIPLEQVTNFNEV
CDEIKKKLISLKEVPNRIECPLIYHLDVAAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GANCQRKMSWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGRPRAFHELNLEEQARHE
KKRLGDYCRRAYKKVRQTKLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQESGDAALVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELVEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNI
MVKEGFTNDQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYDSVAKVADYWLDVLYS
KAANMPDAELFELISENRSMSRKLEDYGEQKSNTISTAKRLAEFLGDQMVKDAGLSCRYI
ISRKPEGTPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHHA
LEAGQAADIEDFGMPARPLQPAILISTKRKRVSQGENSQAVESQEMELTQSWREILGPPP
PTGETQEARLVWLRYHKKKWELQLRQRKERRKRRRLLDGEVQAMGGGVIRDAGPATGLGS
FLRRTARSILDMPWQIVQIAETSHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQKVPKQEE
GATYKKVNRLLPRSNIVYYLYQYSVPEDMYQEHLNEINADLSAPDIEGVYETQVPLLFRA
LVQLGCMCMVNKQLVRDLGGREAETYDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHK
ALFGLFIPSQRKASIFVLDTVRSNQMPNLNTLYGAERTALLEKTSEELLPPEKHTFEVRA
ENDVKAIHRALQRILLNYKGERRGPTLIAVQSNWELRRLVAGMPVLEEFPVVPVHVVDEI
SYNVLDWQRHGARRMVRHYLNLDSCLSQAFDMARYYHLPVGNLPHDVSIFGSDLFLARHL
RKHNHLLWLSPTARPDLGGKEADDSRLVMEADDRGSMEINAQGCYSTVCVELDLQSLAVN
TILQSQHVNDMEGGASLGVSFDVIQQASLEEMMSGNQGASAVASYDETALCSNTFRILKS
MVVGWVREITRYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFK
RLGSTVVYGNFNRILLCTKKRRIDDAISYVEYITNSIHSREIFHSLSISFSRCWEFLMWM
DLANYGGVKGKLPSSVLYGENGTAQKKGKEDGEEGSEDEEEAEEEEDGAGEVDEVEELIE
SSWNIMQYLPQTASCQKYFLMIISAYIAAIYHSMREELRRNAPGATPVKRRGGSQTSQQA
AGDSTALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVTQPSEMFPVLPGSHLPL
SNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYILPEVI
CHHCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQTQYETESIEMALVEALQKKLMSYTLQ
DLACAKCKGVKEANMPLYCTCAGDFELTFPTKSFSEQIKVFRNIAAHYNMNFLEETIDWL
LVMSPQISQSR
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaacagtggacggtacaagtcagagagaggacaagggggtgaccaggac
aatcaacaggatgaccggtcatctatgtcggctgctatccggctggagcgcagccagttc
accgacgagatggacacccgcttcgggttcgagaggatgaaggacccaggagagaagact
ggctggctcatcaacatgcaccctacagagattctggacgatgacaaacggatggtcagc
gctgtggactattatttcatccaggaagatggcagcaggttcaaggtacccctccccttt
aagccctatttctacatagccactaaaaagaactgtgagagagaagtcatctcattcttg
tccaagaagttccaagggaaggtggcgaagctggagatgctccctaaggaggacctggat
ctgcccaatcacctggtgggactaaagaggagctacatcaagctttcattcaacactgtg
gatgacctcatgaaggtcaaacgggagatctcgccggcggtgcgcaagaatcgggagagg
gagaagtccaacgatacctacacctcaatgttatcaagtgcgttggcaggaggcagtgtc
tcggcagcggatgaagatggcatgtccaagaaaacctccgaccagatggacaacatagtg
gacatgagagagtacgacgtgccttaccacatgcgcctgtccatcgaccttaagatccac
gtggctcactggtacaacgttcggtacaggggtagtgcataccctccggagatcatactg
agaaacgacctggtggaacgaccagacccagttgtgctggcctttgacatagagaccacc
aagcttcctctgaaattccctgatgcagaaacggaccagattatgatgatatcctacatg
atcgacggacagggctacctgatcacaaaccgagagattgtctctgaggacattgaggac
tttgagttcacccctaagccagagtacgagggacccttcactgtattcaatgagcctgac
gaggcgggtctcattcagcgatggttcgagcacgtccaagaaaccaagcccgaaatcttt
gtcacctacaacggagactttttcgattggccctttgtggagaccagggctgcccaccac
ggcctgaacatgtacagagagattggcttccagaaggacaaccagggcgagtacagggct
agccaggccatccacatggacgcctttaggtgggtgaagcgtgacagctacctgccggtg
ggcagtcacaacctcaaggcggcggccaaggccaagctgggctatgacccagtggagctg
gaccccgaggagatgtgccgcatggccacagaggagtcacagactctggccacttactct
gtgtcggatgccgtggccacgtattatctttacatgaagtatgtccaccccttcatcttt
gctctttgcaccatcatccctatggagccagatgaggtgctgcgtaagggttcggggacc
ctgtgtgaggcgctgctcatggtgcaggcctatcatgccaacatcgtcttccccaacaag
caggagcaggtgttcaacaagctgacagacgatggccacgtcatggactctgagacctac
gtggggggtcacgtggaggccctggagtccggcgtgttccgcagcgacatcccctgccgc
ttcaaaatgaatccggcggcattcgacttcctgcttcagcgggtggaggaaacgctgcgt
cacgccatcgaggaggaggagaagattcccctggagcaagtcaccaacttcaacgaggtg
tgtgacgagatcaagaagaagctcatctctttgaaggaggtccccaacaggatcgagtgt
ccactcatctaccatctggacgtggcggccatgtaccccaacatcatcctcaccaaccgc
ctgcagccctctgctatggttgacgaggccacgtgtgctgcctgcgatttcaacaagccg
ggggccaactgtcagaggaagatgagctggcaatggaggggggagatcatgccggccagc
cgcagtgagttccaccgcatccagcagcagctggaatcggagaagtttcctccgctcttc
cctaacggcaggccgcgggccttccatgagctcaacctggaggagcaggcccgccacgag
aagaaacgcctgggcgactactgcaggagggcctataagaaggtccgccagaccaagctg
gaggagcgggtcaccaccatctgccagagggagaactccttctacgtggacactgtgcga
gccttcagagaccgccgctacgagtttaagggactgcacaaggtgtggaagaagaaactg
tctgcagcccaggaaagtggtgacgctgccctggtgaagcgctgtaagaacatggagatc
ctctacgattctctccagctagcccacaagtgcatcctcaactccttctatggctacgtc
atgaggaaaggggcccgctggtactccatggagatggctggcatagtgtgctacaccgga
gccaacatcatcacccaggccagagagctcgtggaacagatcgggaggcctctggagctg
gacacggatggtatctggtgcgtcctgcccaacaccttccccgagaactttgtggtgaag
acgagcaacgagaagaagcccaaggtgaccatctcctacccgggcgccatgctcaacatc
atggtgaaggaaggcttcaccaacgaccagtaccaggagctggtggaccctgcctcgctg
acctacgagacgcgggcggaaaacagcatcttcttcgaggtggacgggccctacctggcc
atgatcctgcccgcctccaaagaggagggaaagaaactgaagaaaaggtacgctgtgttc
aacgaggacggctcgctggccgagctgaagggcttcgaggtgaagaggcgaggcgagctg
cagctcatcaagatcttccagtcgtccgtgttcgaggccttcctcaagggcaccactcta
gaggaggtgtacgactcggtggccaaggtggccgactactggctcgacgtgctctacagc
aaggctgccaacatgccggacgcggagctgtttgagctcatctcggagaaccgctccatg
tcgcggaagctggaggactatggcgagcagaagtccaacaccatcagcacggccaagcgg
ctggccgagttcctgggagaccagatggtgaaggacgccgggctgagctgccgctacatc
atctcccgcaagccagagggcacgccggtcacagagagggccatccccctggccatcttc
caagctgaacccagtgttaagaagcacttcctacgcaagtggctgaagatgcccagcctc
cacgacctggacatccgctccatccttgactggagctactacattgagagattgggtagt
gccatccagaaaatcatcaccattccagctgccctgcaacaggtgaagaaccccgtgccc
agagtgcgccacccggactggctccacaagaagctgctggagaagaacgacatctacaag
cagaagaagatcagcgagctgttcaccagcgagggcaagagacaggtggcccatcatgcc
ctggaggcagggcaggcggctgacattgaggactttgggatgcctgcccgacccctgcag
ccggccatactgatcagcaccaagcgcaagcgggtgtcgcaaggagagaacagccaggcc
gtggagtcccaggagatggagctcacccagtcctggagggagatcctcggccctccacca
cccacgggggaaacgcaggaggcgcgcctggtgtggctgcgctaccacaagaagaagtgg
gagctgcagctgcggcagaggaaggagcgccggaagcgccggcgcctgctggacggcgag
gtccaggccatggggggaggggtgatccgggacgcgggccccgccacaggcttgggtagc
ttcctccgccgcacggcgcgcagtatcctggacatgccctggcagatcgtacagattgca
gagaccagtcaccctgggctgtataagctgtgggctgtgatcggcagtgacctgcactgc
atgaagctcaacatcccacgggtgttctacgtcaaccagaaggtccccaagcaggaggag
ggagccacatacaagaaggtgaaccgtcttctgccgcgctccaacatcgtctactacctg
taccagtactctgtccctgaggacatgtaccaggagcacctcaacgagatcaacgctgac
ctctctgccccagacatagagggggtctacgagacacaggtccctctgctgttccgggcc
ctggtacagctgggttgtatgtgcatggtcaacaagcagttggtccgggacctgggcggc
cgggaggctgagacgtacgacctggagcacctggagatgaggtccctggcccagttcagc
tacctggagcctgggagcgtccgacacatctacctttaccaccacagccagggccacaaa
gccctgttcggcctgttcatcccctcacagcgcaaggccagcatctttgtcctggacacg
gttcgcagtaaccagatgcccaacctgaacaccctgtatggggcagagcgtacagccctg
ctggagaagaccagcgaagagctcctgccccctgagaaacacacctttgaggtgcgggcc
gagaacgacgtgaaggccatccaccgagccctgcagcgcatactgctcaactacaagggg
gagcgccgcgggcccaccctgatcgcagtgcagtccaactgggagctgcggcggctggtg
gcgggcatgccggtgctggaggagttcccggtggtgccggtgcatgtggtggacgagatc
agctacaacgtgctggactggcagcgccacggtgcccgccgcatggtccgccactacctc
aacctggacagctgcctgtcgcaggcttttgacatggccagatactatcacttgccggtg
gggaacctgccccacgacgtgtccatctttggttctgacctgttcctggccaggcacctg
aggaagcacaaccacctgctgtggctgtcccccaccgccaggcctgacctggggggcaag
gaggccgacgacagcaggctggtgatggaggctgatgacaggggctccatggagatcaac
gctcagggctgctactcaacagtgtgtgtggagctggacctgcagagtttggctgtcaac
actatcctgcagtcgcagcatgtcaacgacatggagggaggagccagcctgggtgtcagc
tttgacgtcatccagcaggcctcgctggaggaaatgatgtcagggaaccagggagccagt
gcggtggccagctacgacgagaccgccctctgctccaacaccttcaggatcctgaagagc
atggtggttggctgggtgcgggagatcacgcggtaccacaacgtctacgccgacaaccag
gtgatgcacttctaccgctggctgcgctcgcccagctcgctgctttacgacccggcgctg
caccgcaccctacacaacatgatgaagaaggtattcctccagctggtggcagagttcaag
cggctgggctccaccgtggtgtacggaaactttaaccgcatcctcctttgcactaagaag
cggaggattgacgacgccatcagctacgtggagtacatcaccaacagcattcactcgcgg
gaaatcttccactccctctccatctccttctcccgctgctgggagttccttatgtggatg
gatctggccaactatggaggagtgaagggcaaactgccctccagcgtcctgtatggagag
aatgggacagcccagaagaagggaaaggaggatggagaggagggcagcgaggacgaggag
gaagctgaggaggaggaggatggagccggagaggtggatgaggtggaggagctgattgaa
agcagctggaacatcatgcagtatctgcctcagaccgcctcctgtcagaaatacttcctc
atgatcatctccgcctatattgctgccatctaccacagcatgcgggaggagctaagacgc
aacgccccgggagccacgcccgtgaagaggcggggcgggagccagacttcccagcaggca
gcaggagattccacagcacttcccggtatgatctccttctctcaagagtatgtgtccagc
gagctgacccagaacttcttcaccatcacccagaagatccagaagaaggtgacgggcacc
cggagcgtgacccagccctcggaaatgttccccgtcctgcctggctcacacctgcctctc
agcaacccagccctggaattcatcaaatacgtctgccaggtcctctccctggatgccaac
atagtgaaccaggtgaacaagctgaagagggacctgttgcgtctggtagacgtgggtgag
ttctcggaggaagcccagttccgcgacccctgcaactcttacatcctgcccgaggtcatc
tgccaccactgcaacttctgtcgcgacctcgacctttgcaaggacccctcggtggcacag
gacggctctgttttgccccagtggttctgctccaactgccagacccagtatgagactgag
tccattgagatggccctggtggaggccttgcagaagaaactaatgagctacactctgcag
gacctggcttgtgccaagtgtaaaggagtgaaggaggccaacatgcctctttactgcact
tgtgcaggagactttgaactcaccttccccaccaagagtttctcagagcagatcaaagtg
ttccggaacatcgccgcacactacaacatgaacttcctggaagagaccattgactggcta
ctggtcatgagtccacaaataagccagtctcgatga
DBGET
integrated database retrieval system
