Salvelinus sp. IW2-2015 (Arctic char): 111957858
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Entry
111957858 CDS
T05762
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111957858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salp02000
]
111957858
Transporters [BR:
salp02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
111957858
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_2
Pentapeptide_4
Pentapeptide_3
Motif
Other DBs
NCBI-GeneID:
111957858
NCBI-ProteinID:
XP_023834671
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Position
LG33:23521221..23578452
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AA seq
737 aa
AA seq
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MDDSYDNRTSLVKGAKDIAKEAKRHAVKKVNKVVDSATDEYSQRKYSRFEDEVDVGDDFY
HNPLRQDGGYNDNDQASDASDATEGHDDEDEIYEGEYQGIPAAEDRRAREGQVALGQPVT
DSLRERKELEKERQADEEELAQQYELIIQECGHGRFQWQLFLVLGLALMSDGVEVFVVGF
VLPSAETDMCALGGSNSRSGWLGSIVYLGMMLGAFFWGGMSDKVGRRQCLLICMCVNGFF
AFLSSFVQGYGMFLLCRVIAGFGTGGVVPIVFSFFAEVLSREKRGEHLSWLCMFWMIGEI
YASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPESPRFYLEVG
KHDEAWMILKQIHDTNMRARGQPEKVFTVNRIKIPKHLDELVEMKSESGNAVSKALFRSK
TELRGILVNFIKCFDYPLKENTIKLAIVWFTLSFGYYGLSVWFPDVIKHLQADDYASKVK
THSNERIEDFTFNFTLENQIHTNGVFISDRFLNMKLKSVTFIDSTFRNCYFDDVTSVGSY
FRNCTFIEAFFFNTDIDESKLIDGTEVINSSFHHNKTGCQMTFDDDYSAYWVYFINFLGT
LAVLPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLSISA
WNSLDVVTTESFPTDRRGTGFGFCNALCKLAAVLGNVIFGSLVGITKAIPILLASSVLVC
GGLVGLRLPDTRANVLM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagctacgataacaggacatccttagtgaagggggccaaggacatcgccaag
gaggccaagcggcacgccgtgaaaaaggtcaacaaggtcgtggacagcgccacagacgag
tactcccagcgcaaatacagccgtttcgaggacgaggtagacgtgggggacgacttttac
cataatcccctgaggcaggacggaggctacaatgacaacgaccaggccagtgatgccagc
gatgccacagagggccatgatgacgaagatgagatttacgagggggagtaccaggggatc
ccagcagctgaagacaggcgggccagggaggggcaggtggctctggggcagcccgtcaca
gacagcctgagagaacgtaaggagctggagaaggagaggcaagcggacgaggaagaactg
gcccagcagtatgagctgatcatccaggagtgtggccatggcaggttccagtggcagctg
ttcctggtgctgggcctggccctcatgtcggatggggtggaggtgtttgtggtggggttc
gttctgcccagcgccgagacggacatgtgtgctctgggtggctccaactccagatctgga
tggctaggcagtattgtgtacctggggatgatgttgggagcgtttttctgggggggcatg
tcagacaaggtgggccgcagacagtgtctgctcatctgcatgtgtgtgaacggcttcttc
gccttcctgtcctccttcgttcagggctacggcatgttcctgctctgccgcgtgatcgca
ggctttggaacagggggggttgtgcctatagtcttctccttttttgcggaggtgctgtcc
agagagaagagaggggagcacctgagctggctgtgcatgttctggatgattggagagatc
tatgcttcagccatggcctgggccattataccacactacggctggagtttcagtatgggt
tcggcctaccagttccatagttggagagtgtttgtggtggtctgcgccctgccctgcgtc
tgtgctgtggtggctctcacctttatgcccgagagccccaggttttacctggaggtgggg
aagcatgatgaggcttggatgatcctcaaacagatccatgacaccaacatgcgagcgcgt
gggcagccggaaaaagtcttcactgtgaacagaatcaagatccccaagcatctggatgag
ctggtggagatgaagtcagagtcggggaacgcagtctccaaggccctcttcaggtcaaag
acagagctacgtgggatcttggttaactttattaagtgttttgactaccctctgaaagaa
aacactatcaagctggctattgtgtggtttacactgtcatttgggtactacggcctgtct
gtgtggttccctgatgtcatcaagcatcttcaggcagacgactatgcctccaaggtgaag
acccacagcaacgaacgcatcgaggacttcaccttcaacttcaccctggagaaccagatc
cacaccaacggggtcttcatcagcgacagatttcttaatatgaagttgaagtccgtcacc
ttcattgactccaccttccgtaactgctactttgacgacgtgacgtcagtgggatcctac
ttccggaactgtaccttcatcgaggcattcttcttcaacactgacatcgatgaatcaaaa
ctgatagacggcacagaggtgatcaacagctcgttccaccacaacaagacgggctgtcag
atgacgtttgacgacgactacagcgcctactgggtctactttatcaacttcctgggaact
ctagctgttctacccggcaacattgtttctgcactgctcatggataagattggacgccta
tcgatgttaggtggctccatggttctgtcagggatcagttgtttcttcctgtggttcggc
accagtgagtcgatgatgatcttcatgctgtgcctttacaacggcctgagcatatcagcc
tggaactcactggacgtggtcaccacagagtccttccctacagacaggagagggacaggt
tttgggttctgtaatgctctgtgtaagttagctgccgtgttggggaacgtgatctttggt
tcgctggttggcatcaccaaggccatccccatcctcctggcctcatctgtgctggtgtgt
ggaggtctggtggggctccggctgcctgatactcgggccaacgtcctcatgtag
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