Salvelinus sp. IW2-2015 (Arctic char): 111957870
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Entry
111957870 CDS
T05762
Name
(RefSeq) PDZ and LIM domain protein 2 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111957870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111957870
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
111957870
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
Ogr_Delta
Motif
Other DBs
NCBI-GeneID:
111957870
NCBI-ProteinID:
XP_023834691
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All DBs
Position
LG33:complement(17759571..17828405)
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AA seq
372 aa
AA seq
DB search
MALTVNLIGPSPWGFRIYGGRDFKKAITISKVNGGSKAELAALQPGDVILEINGENTVDM
LNVEAQNKIKNSKTQLQLLVERPEPPSPEQTNGTTTPEKLTGRFQEAMLVSRDENQNYRE
YSISSPASLSPGPYSPEPPSSPEGKRERLTPTSTKSIQLCSWSPEEKTSSYKLSRPLSQE
FSSSDFRSNSVSSRTPTPPGCYSPHSPVDCELSVSPRHSSSSSDSTMQRFDRDSEVYKMI
QENKESRTAPRQSNTFRMLQEVLESDEKEAAVRFPGLSPKPTPPKPTSPGGGVPKYHTCE
KCGTSIVTQAVRIMDDRFRHPECYTCSTPECGLNLKMRGHFWVGEEMFCEKHAHENYQGL
GTAPRATISPRH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacagtgaacctgattgggccgtctccatgggggtttagaatatacggagga
agggacttcaagaaggcgataaccatttccaaggtcaacgggggcagcaaagccgagctg
gctgccctgcagcctggtgatgtcatcttggagatcaatggagagaacacagtggacatg
ctcaatgtggaggcccagaacaagatcaagaactccaagactcaactgcagctgctggtg
gagaggcctgagccccccagccctgaacagaccaatggaactaccaccccagaaaagctc
actggacgcttccaggaagcaatgctggtgagtcgagatgagaaccagaactacagagag
tactccatctccagcccagcatccctgtcacctgggccctactcccctgagcccccttcc
agccctgaggggaagagagagaggctcacacccaccagcaccaagagcatccagctgtgt
tcgtggtctccagaagagaagacgtctagttacaaactgtccagaccactgtcacaggag
ttctcctcttcagacttcaggagtaactctgtgtccagtcgaacgcccacccctccagga
tgctactcgccccacagccctgtcgactgcgagctgtctgtctcccccaggcacagcagt
tccagctctgactctaccatgcagagatttgaccgggattcagaggtctacaagatgatc
caggagaacaaggagtctcgcacggcccctcgacagtccaacaccttccgcatgctgcag
gaggttttggagtctgatgagaaggaggcagctgtgcggttcccaggactctcccccaaa
cccacccctcccaaacccacatcacccgggggcggagtccccaagtaccacacctgtgag
aagtgtggcaccagcattgttacacaggcggtgcgcatcatggacgaccgcttccgccac
ccagagtgctacacctgttctacaccagagtgcggtctcaacctgaagatgcgaggtcac
ttctgggtgggagaggagatgttctgtgagaagcatgcccacgagaattaccagggcctg
ggcactgccccacgtgccaccatctcgccccgccactga
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