Salvelinus sp. IW2-2015 (Arctic char): 111957872
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Entry
111957872 CDS
T05762
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111957872
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111957872
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Motif
Other DBs
NCBI-GeneID:
111957872
NCBI-ProteinID:
XP_023834702
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Position
LG4p:27282521..27288625
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AA seq
831 aa
AA seq
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MENITPDQWQAIVNKKLTFPPELITAIQEDNSILVGSLLSTGDGIIRQLDESEDRLWREA
LNLSIRMGNEDIFSALMLGVKFDFRQIYEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYDIVTMLTKKGHAIPLPHSISCTCLECR
NGRQYDLLKFSLSRINTYRGMASRAYLSITTEDAMLSAFRLSRELRKLSKKEPEFKPQYL
SLEELCQEFAVEMLAMCRNQSEVTTILNICDDDNEDELDEQTFEEGIPTLSRIRLAVNYN
QKLFVSHPICQQVLSSIWCGNIPGWRGSKTVWKLTVSLGIFFTMPLLCMIYWVAPKSKIG
KTLKIPVIKFLLHSASYLWFIITLLAESIFMELYRDEFASRQQNILYNSLHMIWVVGFFW
SECKNVWAEGLRGYIVDWSNILDMIVLSMYLASFGLRVLIMAIGHFVCQDQNLVEKCAYF
TQTVRDEWWQEDPQLISEILFAVTSMLSFTRLAHILPAHESLGTLQISIGIMIDDMMRFM
FLLMIIGTAFLCGLNNIYVPYATSPHLGRFNETFNFLFWTMFGASNQGYVDMPDFVLAQF
VGRVLYGVFTLVIVIILLNLLIAMITNSFQKIEDDADVEWKFARSKLYLRYFREGSTIPV
PFNLVPTPKALFYLLRSFFCCCNRKKIPDYPPIASVSNSTMNNSGEAGMDRVSYRLQVVK
ALVQRYIEAARREFGETTRKDVGNRITELNKGVGRLHSDMKKFHQNLQNNKSFGSKGDGG
DFLGKYIKGAKNNFKNFDKNEAMGNSPDLLRVNLHLVGVVEEGKKEEGKQK
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggagaatattacgccagaccaatggcaggcgattgtgaacaaaaagcttactttcccc
ccggagctgataacagccattcaggaagacaactcaattctggtgggcagcctgctgtcc
acaggggacggcatcatccgccagctggatgagtctgaggaccgtctgtggagagaagcc
ctgaacctgtccatccgcatgggcaacgaggacattttctccgctctgatgctgggcgtc
aagtttgacttcaggcagatctacgaggcgctgctggtggcggtggacaccaaccagccc
cgggtggtcaagaggctcctggaccgcctggaccaggaaaagggtaacaagatggatgtg
cgctccttctccatggccatatttgaccactccattgacgactcccagtttgcccccgga
gtgaccccgctcaccctggcctgtcagaaggacctgtatgacattgtcaccatgttgact
aagaaaggtcatgccatccctctgcctcactctatctcctgtacctgtctggagtgcagg
aacggccgtcagtatgacctgctgaagttctctctgtctcgtatcaacacctaccggggc
atggccagccgggcatacctctccatcaccacagaggatgccatgctcagtgccttcaga
ctcagtcgggaactacgcaagctctccaagaaagagcctgaatttaagccccagtacctg
agcctggaagagctgtgtcaggagttcgcagtggagatgctggccatgtgtcgcaaccag
agtgaggtcacaacaatcctgaacatctgtgatgacgataatgaagatgaactggacgag
cagaccttcgaggaggggattccaaccctgtcacgcatacgccttgcagtcaattacaat
caaaaactgtttgtgagtcatcccatctgccagcaagtgctgtcgtccatttggtgtgga
aacatcccagggtggcggggcagcaagacggtctggaaactcacggtgtctcttgggatc
ttcttcaccatgcctctcctctgtatgatctactgggtcgctcccaagtccaagattgga
aagactttgaagatacctgtgatcaaattcctgctgcactctgcctcctacctgtggttc
atcatcacccttctagctgagtctattttcatggagctgtaccgcgatgagttcgcatcc
cggcagcaaaacatcctctacaactccctccatatgatctgggtggtcggtttcttctgg
agtgagtgtaagaatgtgtgggcggagggtctgaggggttacatcgtggactggtccaac
attctggacatgatagtactcagcatgtacttggcctccttcggtctgagagtcctcatc
atggcaattggtcactttgtttgccaagaccaaaacttggttgagaagtgtgcctacttc
acccaaacagtgcgggatgaatggtggcaggaggaccctcagctgatctcagagattctg
ttcgctgtgaccagcatgctcagcttcacccgactggcccacatcctgcctgcccatgag
tctctgggtactctgcagatctccattggtataatgatagatgacatgatgaggttcatg
tttctcttgatgatcattggaacagcttttctctgtggactgaataatatctatgtgccc
tacgcaacttctccacatcttggacgcttcaatgaaaccttcaactttctcttctggacc
atgtttggtgcatctaatcaaggctatgtggacatgccagattttgttctggctcagttt
gtgggcagggtcctgtatggggtcttcactctcgtcattgtcattatcctgctcaatttg
cttatcgccatgatcactaattcattccagaagatagaggatgatgctgatgttgaatgg
aagtttgctcgttcaaagctctacttgagatacttcagagagggctccactataccggta
cccttcaacctcgtccccactccaaaggccttgttctacttactgaggagctttttctgt
tgttgcaaccgaaagaaaattccagactatcctcctattgcctctgtgtccaacagtaca
atgaacaacagtggagaggcagggatggaccgagtgtcatatcgcctgcaggtggtcaag
gcgctggtacagcgctacatagaagcagcccgcagggagtttggagagacgacacgtaaa
gatgtggggaacaggatcacagagctgaacaagggggtggggagacttcactctgatatg
aagaagttccatcagaacctgcagaacaacaagtccttcggctcaaagggcgatggaggc
gacttcctgggcaagtacataaaaggagcaaagaacaactttaagaactttgataaaaat
gaggcaatggggaatagcccagacctgttacgagtcaatctgcacctcgtaggggtggtg
gaggaggggaagaaagaggagggaaaacagaaatga
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