Salvelinus sp. IW2-2015 (Arctic char): 111957879
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Entry
111957879 CDS
T05762
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03015
mRNA surveillance pathway
salp04261
Adrenergic signaling in cardiomyocytes
salp04382
Cornified envelope formation
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111957879
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111957879
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
111957879
09158 Development and regeneration
04382 Cornified envelope formation
111957879
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
salp01009
]
111957879
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111957879
03036 Chromosome and associated proteins [BR:
salp03036
]
111957879
Protein phosphatases and associated proteins [BR:
salp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111957879
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111957879
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111957879
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
111957879
NCBI-ProteinID:
XP_023834710
LinkDB
All DBs
Position
LG33:complement(16126969..16156875)
Genome browser
AA seq
447 aa
AA seq
DB search
MAGAGGGGNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEL
ESKNQPQCRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFHPMDLMVEASPRRVFANAHTYH
INSISVNSDCETYLSADDLRINLWNLEITDRSFNIVDIKPANMEELTEVITAAEFHPNQC
NTFVYSSSKGTIRLCDMRASALCDQHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY
MMTRDYLTVKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYNNFFRMFDRGYRQDVTLEASRESSKPRSVLKPRKVCTGGKRKKDEISVDSLDFNKKI
LHTAWHPQDNIIAVATTNNLYIFQDRL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagccggcggcgggggcaatgatgtgcagtggtgtttttctcaagtcaaagga
gcgattgatgacgatgttgctgaagctgacatcatatccactgtggaattcaatcactct
ggggagctactagccactggggacaaggggggccgtgttgtcatctttcagcaggagcta
gagagtaagaaccagccacagtgccgtggagagtacaatgtttacagcaccttccagagc
cacgagcctgagttcgactacctgaagagccttgagatcgaggagaagatcaacaagatc
cggtggctgcctcagaagaacgctgcacagtttctcttgtccacgaatgataaaactata
aagctgtggaaaatcagtgaacgggacaagagaccagaggggtacaacctgaaggaagag
gatgggcgttatagagaccccaccactgtcacaacactacgggtcccagtgtttcatccc
atggacctgatggtggaggccagccccagacgagtgtttgctaacgcgcacacctaccac
atcaactccatctcggtcaacagcgactgtgagacctacctgtctgccgatgaccttcgc
atcaacctctggaacctggagatcactgaccgcagctttaacattgtggacatcaagcca
gctaacatggaggagttgacggaggtgatcacagcagcagagttccatcctaaccagtgc
aacacctttgtctacagcagcagcaagggcaccatccgcctctgtgacatgagggcatca
gctctctgtgaccagcactccaagctgtttgaagagcctgaggatccaagcaaccgctca
ttcttctctgagatcatctcctccatctctgatgtcaagttcagccacagtgggcgctac
atgatgacccgggactacctcaccgtcaaaatctgggacctcaacatggagtcccgtcca
gtagagacttatcaggttcatgaatacctcaggagtaaactgtgctcactctatgagaac
gactgcatctttgataagtttgagtgctgctggaatggaaacgacagtgttgtgatgacg
ggctcgtacaacaacttcttccggatgtttgaccgaggctaccggcaggatgtgaccctg
gaggcgtctcgggagagcagtaagcctcgctctgtgctcaagccccgcaaggtgtgcaca
ggtgggaaacgcaagaaggacgagatcagtgtagacagcctggactttaacaagaagatc
ctccacacggcctggcacccccaggacaacatcattgccgtggccaccactaacaacctc
tatatatttcaggacagactgtaa
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