Salvelinus sp. IW2-2015 (Arctic char): 111957891
Help
Entry
111957891 CDS
T05762
Symbol
vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04140
Autophagy - animal
salp04148
Efferocytosis
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111957891 (vps33a)
04148 Efferocytosis
111957891 (vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111957891 (vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111957891 (vps33a)
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111957891 (vps33a)
Hops complex
111957891 (vps33a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Takusan
Motif
Other DBs
NCBI-GeneID:
111957891
NCBI-ProteinID:
XP_023834739
LinkDB
All DBs
Position
LG33:19570145..19586953
Genome browser
AA seq
599 aa
AA seq
DB search
MSAHLSYGRVNLNILREAARKELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGGRLPAADVKNIIFFVRPRLELMDIIAENVISEDKMHSPRDFHILFVPRRSML
CEQRLKEQGVLGSFINIDEYILDLIPYDGDLLSMESEGAFRECYLESDQTSLYHTAKGLM
TLQALYGTIPQIFGKGECARHVANMMLRMKREFAGSQTQILPVFDSLLLLDRNIDLLTPL
ATQLTYEGLIDEVYGITNGYVKLPPEKFAAQKKQGEVGKDLPTEPKKMQLNSAEELYAEI
RDKNFNAIGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAE
LIKDITTSEAFFDNLTVEQEFMTGVDTDKVNTYIEDCIAQKDPLIKILRLVCMQSVCNNG
LKQKILDYYKREILQTYGYEHMLTLNNLEKTGLLKPQTSTRNNYPTIRKTLKLWMEDANE
QNPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPAGLHKKRQQ
GENRTTLVFFLGGVTYAEIAALRFLSQMEDGGTEYIIATTKLINGTSWIKSLMDRPEAP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcacttatcctatggaagagtaaatttaaacattttgagggaagcagcgcgg
aaggaactccgtgagtttttggacaaatgtgcaggaagcaaggctattgtgtgggatgaa
tacctgactggaccctttggattgatagcacaatattccttgctgaaggaacatgaggtg
gagaagatgttcaccctcaaaggggggcgtcttcctgctgctgacgtgaaaaatataatc
ttctttgtccgtcccagactggaactgatggatattatagctgagaatgtcatcagtgag
gataagatgcattccccacgtgacttccacatcctgtttgtgccccggcggagcatgctc
tgtgagcagcggctgaaggagcagggggtcttgggctcgttcatcaacatagacgagtac
atcctagacctcatcccttatgatggagacttgctctccatggagtctgagggggccttc
agggaatgctatctagaaagtgaccagacaagtctgtaccacaccgccaagggccttatg
actctccaggctctgtatgggaccatcccccagatatttgggaaaggggagtgtgcacgg
catgtagctaatatgatgcttaggatgaagagggagtttgctggcagtcagactcagatc
ctgcctgtgttcgactcactgctgctgctggaccgcaacatagacctgcttacccctctg
gccacacagctcacctatgagggcctcattgacgaagtttatggaatcaccaacggttat
gtgaagttgcctccggagaagtttgctgcccaaaagaagcagggtgaggtgggtaaagac
ctgcccacggagcccaagaagatgcagctcaactcagcggaggagctgtatgctgagata
cgggacaaaaacttcaacgccataggggctgcactgagcaagaaggccaagatcatctct
gctgcctttgaggagcgacataatgccaaaacagttggcgagataaagcagtttgtgtcc
cagctgccccacatgcaggcagcacggagctcgctggccaatcacacctccatagctgaa
ctcatcaaggacatcaccacctcagaggccttctttgataacctgacagtggagcaggag
tttatgactggagttgacacagacaaggttaacacatatattgaggactgtattgcccag
aaggatcctctgatcaaaatcttgcggctggtctgtatgcagtcagtctgcaacaatggc
cttaagcagaagatattggactactacaagagagagatcctgcagacctatggatacgaa
cacatgcttaccctcaacaacctggagaagacaggtcttctgaagccccagacaagcacc
aggaataactaccccaccatcaggaagacactcaaactttggatggaggatgccaacgaa
cagaaccccaatgacatctcctatgtgtacagtggttatgctcctctcagcatccgtctg
acccaggtgttggccaggcccggctggcgcagcatcgaggaagttctgaagatgctccct
ggtccacactttgaggagagacaacagctgcctgctggtctccataagaaacgccagcag
ggggagaacaggaccaccctggtgttctttctgggaggggtgacttatgcggaaattgct
gccctgcgcttcctgtctcagatggaggatggtggcacagagtacatcattgccactacc
aagctcatcaatggtaccagctggatcaagtctctgatggaccgcccggaggccccctga
DBGET
integrated database retrieval system
