Salvelinus sp. IW2-2015 (Arctic char): 111957925
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Entry
111957925 CDS
T05762
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salp02000
]
111957925
Transporters [BR:
salp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
111957925
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
111957925
NCBI-ProteinID:
XP_023834796
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Position
LG33:21238640..21297231
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AA seq
611 aa
AA seq
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MGVGSENAASTTKLSIRHGVYKEETNIDLKAPLNVEGMLPKKVGHMTAERAIWGRRLEFV
LASVGYAVGLGNVWRFPYLCYRSGGGAFLIPYFLMLFLCGIPLLFMEFAIGQYTRLGPVH
ALAKICPLFKGVGIATVVISFVLCTYYNVLMSWALYYLFNSFRAPFPWQSCNNTWNAVGN
CSIGFPGNTTHLHSASQQYFDHRLLEITNGIEEAGGLRWELFGILILAWVIVYLCIFKGV
KSTGKVVYFTATFPYFMLFVLLINNVQLPGAKNGMLYFLKPKWSKLLDVQVWVNAAAQVF
NSIGIGFGTMISMASYNKFNNNILRDTLIVSLANSATSILAGFVIFSAIGYMAHVHNLPV
DNIATDGPGLVFVVYPEVFSTMPLPQLWAPLFFFMLLCLGLDSQFAMVEVAVTSJMDGCG
PKVLRVLKRQEIIVLAVCVIGFLLGIPHITKGGMYVFQLMDHYTAVVSLMFLAFFEVLAV
CWVFGLRRMTIVIKRMLGKAPNIYFRSCWMFFSPVLVLCILISSIVQYTPARYGKSYTYP
VWAEVVGWGISLISIVWIPLGALHEICRNKGTLMQRIKTAMTPTIELDPVNBLPEKQRVD
IPESVVFITPL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgggagtggggtccgaaaatgcagcatccaccaccaaactatccattcgccatggggtt
tacaaagaggagacgaatatcgatctgaaagcacccttaaacgtagagggtatgttacca
aagaaagtggggcacatgactgcagaaagagccatctggggccgccgccttgagtttgtc
cttgcatccgtggggtacgcggttggacttgggaacgtgtggcggtttccatacctctgc
tacaggagcggtggaggggccttcctcattccttactttctcatgctgtttctgtgtgga
atcccactgctcttcatggagtttgccattgggcagtacacccgactgggaccagtgcac
gctctagccaaaatctgccccttgttcaaaggtgtmggcattgccacagtcgtgatctcc
tttgtgctctgcacctactacaacgttctcatgagctgggcgctctactacctcttcaac
tcattccgagcccccttcccctggcagtcctgcaacaacacctggaatgctgttggtaac
tgctccatcggtttccctggcaacaccacccacttgcattcggccagtcagcaatacttt
gatcacaggcttctggagataaccaatggtattgaggaggcaggaggkctacgctgggag
ctgtttggcatccttatcctggcctgggtcattgtttacttgtgcatcttcaaaggtgtc
aaatccactggcaaggttgtttatttcacrgccacgttcccatacttcatgctgtttgtc
ttgctcatcaataatgtccagcttcctggagccaagaatgggatgctttacttcctgaag
cctaagtggagcaagctgcttgacgttcaggtgtgggttaacgctgcagcccaggtattc
aactccattggaataggatttggtaccatgatctccatggccagttacaacaagttcaac
aataacatcctcagggacacattgattgtctccttagctaactcggccaccagtatcctg
gctggttttgtgatattctcagccattggctacatggctcatgtccacaacctcccagtg
gacaacatcgccacagatggtcctggcttggtgtttgtggtgtatccagaggtcttctcc
actatgcctctgccccagttgtgggctcctctgttcttcttcatgcttctctgcctggga
ctggacagtcagtttgctatggtggaggtggcggtgacgtccwtaatggacggctgtggc
cccaaggtgctgcgtgtcctgaagaggcaggagatcatcgttctggctgtctgtgttatc
ggctttcttctaggcattcctcacatcactaaggggggaatgtacgtgttccagctgatg
gaccactacactgctgtggtgtctctcatgttcctggccttctttgaggtcctcgctgtc
tgctgggtttttggactgcggcggatgaccatcgtgatcaagaggatgttgggaaaggct
cccaacatctatttccgctcctgctggatgttcttctcccctgtgctggtcctgtgcatt
ctgatctccagcatcgtccagtacacgcccgctcgctatgggaagtcctacacataccct
gtctgggcagaggtggtgggctggggaatctccctgatctccatcgtgtggatccccctg
ggagccctgcacgagatctgcagaaataagggcacactgatgcagaggataaaaacagcc
atgactcctacaatagagttggaccctgtcaacratctaccagagaagcagagagtggac
ataccggagtctgttgtctttatcactcctctgtga
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