Salvelinus sp. IW2-2015 (Arctic char): 111957934
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Entry
111957934 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36-like
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111957934
04121 Ubiquitin system [BR:
salp04121
]
111957934
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111957934
Membrane trafficking [BR:
salp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
111957934
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111957934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
SPRY
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
111957934
NCBI-ProteinID:
XP_023834810
LinkDB
All DBs
Position
LG33:1164360..1191640
Genome browser
AA seq
751 aa
AA seq
DB search
MSDTADTEENQDMLPSLVEQIVQRITAGEVPIKNIERELICPICKELFTHPLILPCQHSV
CHKCVRDLLLLNHEDSFDAGSECSLPGSPGLRSRVHSPSMERLDRLARSGSISSPGWRRG
SVTPRITTFPCPGCQHDVDLGERGMSMLFRNFTLESIVERYRQAARAAVAIMCNMCKPPQ
QEATKSCMDCKASYCNECFKFHHPWGTPKAQHEYVGPTMNFRPKVLMCPEHEMEKVNMYC
EVCRRPVCHLCKLGGSHANHKVTTMSSAYKILKEKLSKAIHYLISKEDQVKTQISHLEVL
INETEENGQLAERRTNEHFERLFETLQERKFEMLRSIEQSRTRRLDQLRGQVDEYQGMLE
NSGLVGYAQEVLKETDQSCFVQTAKQLHTRIAKSTESLRTFHPVADPSFDEFVLETSREE
TLLKELCFGGVPDPPIIDLSRSRVYNEGLVCWQLAEDTLATDHQVLEYRKLGVEKDEEEG
SSRWRPTVPVYGPSTVVCDLEANSLYSFRVRSCRNSLYSPYSPEVTFHTPPAPVFGFLFN
DKCGFSSERLTLSKLRDSVESAAGMAFLLAAERVQTGSYMGLDYIIGDTGISQGRHYWAF
RVEPHSYLVKVGVASDSKLLEWIHNPRDTSSPRYDHDSGHDSGSEDACYDLSQPFTLLTV
GMGKVFIPKASISSATAGNDHGNRVLPMPQRIGVYLDYEAGRVYFYDANTMRCLYERQVD
CTGTMYPAFGLMGSGKVHLEEFITAKRLSYM
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatactgcggataccgaagaaaatcaggatatgctaccgagtttggtcgagcag
atagtccagcgaataacagccggagaggtccctatcaagaacattgagcgtgaactcatt
tgtccgatctgcaaggagctgtttacacacccactcatcttgccctgtcagcacagcgtt
tgtcacaagtgtgtccgagacctgctgctattgaaccatgaggattctttcgatgcaggc
tcagagtgttccctccctgggagcccagggctccgatccagagtgcactcgccaagcatg
gagaggctggataggcttgcaagatcaggctctatctcctcaccaggatggaggcgtggc
tctgtgaccccccgcatcaccactttcccatgcccgggttgccaacacgacgtggacctg
ggcgagcggggcatgagcatgctcttccggaacttcaccctggagagcattgtggagcgc
taccggcaggcagcccgcgccgccgtggccatcatgtgcaacatgtgcaagccgccccag
caggaggctaccaagagctgcatggattgcaaggccagctactgcaacgagtgcttcaag
ttccaccacccctggggcacccccaaagcccagcacgaatatgtggggcccaccatgaac
tttaggcccaaggtgctgatgtgtccggagcatgagatggagaaggtcaacatgtactgc
gaggtgtgccggcgtccagtctgtcacctgtgcaagctgggaggctctcatgcaaaccac
aaagtcacaaccatgagcagcgcctacaagatcctcaaggagaagctatcaaaggctatc
cattacttaatcagcaaagaggaccaagtgaagactcagatttcccacctggaagtgttg
atcaatgaaaccgaggagaacggccagttggcggagcgtcggaccaacgagcactttgag
cgactgttcgagaccctccaggagaggaagtttgagatgctgcgctccatcgagcagtcg
aggacgcggcgtctggaccagcttcggggccaggtggacgagtaccagggcatgttggag
aacagcggcctggtgggttatgcccaggaggttctcaaggagacggaccagtcctgcttt
gttcagactgccaagcagcttcacaccaggatcgcgaaatccaccgagtctctgaggaca
ttccaccccgtggccgacccctcctttgatgagtttgtgctggaaacttccagagaggag
actctgctgaaggagctatgttttgggggagtccctgaccctcccatcatcgatctgtcc
cgcagtcgcgtctacaacgaaggcctggtgtgctggcagttggctgaggacaccctggcc
acagaccaccaggtgctggagtacaggaagctgggtgttgagaaggacgaggaggagggc
agcagccgctggcgccccacagtcccggtgtacggccccagcacagtggtgtgcgacctg
gaggccaacagcctctactcgttcagagtacgcagctgccgcaactccctctacagcccc
tacagcccagaagtcaccttccacacaccacctgctccagtgtttggcttcctgttcaat
gacaagtgcggcttcagctcggagcggctgacgttgagtaagctgcgtgactcggtggag
agtgcggccggcatggccttcctgctggctgctgagcgtgtgcagacaggcagctacatg
ggcctggactacatcatcggtgacacgggcatctctcagggcagacactactgggccttc
cgcgtggagccccactcctacttagtcaaggtgggcgtggcctctgattccaagctgctg
gagtggatccacaacccccgggacactagtagccccaggtacgaccacgacagtgggcac
gacagtggcagcgaggacgcgtgctacgacctgtcccagcccttcaccctgctcaccgtg
ggcatgggcaaagtgttcatacccaaagcatctatctcttccgccaccgccggcaatgac
cacggcaaccgggtgctgcccatgccccagcgcattggcgtgtacctggactacgaggcg
ggccgtgtctacttctacgacgcaaacaccatgagatgcctttacgagcggcaagtggac
tgcaccggtaccatgtatcccgcgtttggcctcatgggtagtggcaaggttcatctagag
gagttcatcacagcaaagcggctgtcgtatatgtga
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