Salvelinus sp. IW2-2015 (Arctic char): 111957969
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Entry
111957969 CDS
T05762
Name
(RefSeq) claudin-4
KO
K06087
claudin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03272
Virion - Hepatitis viruses
salp04382
Cornified envelope formation
salp04514
Cell adhesion molecule (CAM) interaction
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
111957969
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111957969
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111957969
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111957969
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111957969
04147 Exosome [BR:
salp04147
]
111957969
Cilium and associated proteins [BR:
salp03037
]
Other cilia and associated proteins
Stereociliary proteins
111957969
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
111957969
Exosomal proteins of colorectal cancer cells
111957969
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF1582
MFS_MOT1
Clc-like
Motif
Other DBs
NCBI-GeneID:
111957969
NCBI-ProteinID:
XP_023834856
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Position
LG33:complement(24185187..24186975)
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AA seq
217 aa
AA seq
DB search
MVSAGLEILGLGLCVIGSLLVMVVCGLPMWKVTAFIEANIVVAQTIWDGLWMSCVVQSTG
QMQCKVHDSVLALGHDLQAARALTVISCVFGVLGLMVVIAGAQCTNCISAENVKTRVVNA
GGVIYITSGLFVLVPLCWMANNIISDFYNPQVPASKKREIGAALYIGWAATALLLVGGAL
LCCSCPSNGNSGYSAKYSPTKRATPNGTGDYDKRNYV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgctggactggagatccttgggctggggctgtgcgtcattggctcgctcctg
gtgatggtggtgtgcgggctgcccatgtggaaggtaacggcgttcatcgaggccaacatt
gtggtggctcagaccatctgggatgggctctggatgtcttgtgtggtgcagagcaccggc
cagatgcagtgcaaggtgcacgactcggtccttgcgctcggccacgacctgcaggcggcg
cgagccctcaccgtcatctcgtgtgtgtttggcgtgctggggctgatggtggtgatcgcc
ggggcgcagtgcaccaactgcattagcgccgagaacgtcaaaacccgggtggtgaacgcc
ggaggggttatctacatcaccagtgggttgtttgtgttagtacctctctgctggatggcc
aacaacatcatctctgacttctacaacccacaggtgcccgcgtccaaaaagagggagatc
ggggccgcgctctacatcggttgggcggccacggcgctcctgctggtcgggggcgcgcta
ctctgctgctcttgtccttctaacgggaattcgggctattcggccaaatattccccgacc
aaacgggccacaccaaacgggaccggagactatgacaaaaggaattacgtgtag
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