Salvelinus sp. IW2-2015 (Arctic char): 111957975
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Entry
111957975 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111957975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111957975
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111957975
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111957975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_2
zf-RING_5
zf-UDP
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
111957975
NCBI-ProteinID:
XP_023834884
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All DBs
Position
LG33:complement(13622054..13681553)
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AA seq
653 aa
AA seq
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MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYSAATCHHIENVLKGDVRGTV
VLGQVDAQLASYIIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKLYGGAAGAPGATGTL
NVVRQSNTFAGTTLWSPTSGAGSNNIQHNNISAGSGQAKAEQVQSPLSSSNFPCSPALPS
LPLAHGHSHTHAHSHGHHVIINGQNNLNRPGTQRISMGTARGAIPPGVPALPVKNLTGSG
PVHPAIAGMTGILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGVNGIRRKTKKKHLR
KGKNPEDVVRRYTEKVKVAPDEDCTICMERLVMSSGYEGVLQHKGIKPEMVGKLGKCGHI
YHLLCLVAMYNNGNKDGSLQCPTCKAIYGEKTGTQPPGKMDYHVIPHCLPGYLEAKTIRI
VYDIPAGIQATEHPNPGKKFSARGFPRHCYLPDNDQGRKVLKLLIMAWDRRLIFTIDTSS
TTGESDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVVEDNLKD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcccaggctctggggtgctggtgtcggtcaacgggctggggtaccctcctcag
aacctggcccgggtggtggtgtgggagtggctgaacgaacatgggcgctggcggccctac
agtgcggcaacgtgccaccacatagagaacgtactgaagggggacgtgcgggggactgtg
gtccttggacaggtggatgcccaactggcctcttacatcatcgacctgcagtccatgcac
cagtttagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccgtcg
tcagccccggggaagggtgtggtgtgggagtgggagaacgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggtttctgctacctcattgacttcaacagtatggtccagaccaac
cggcagagccagaggaaacgccgcctgcgccgacgcatggacctggcctaccctctcatc
atgggctccatccccaagtcccagtcgtggcctgtgggcgccagctccggccaaccctgc
tcctgccagcagtgcattctagtcaacagcacgcgggccgcctccaacgccatcctggcc
tctcagcgccgtaagctgtacggaggggccgcaggagctccaggggccacaggcacgctt
aatgtggtacggcagagtaacactttcgccggaaccacactctggtccccaacctccggt
gccgggagcaacaacatacagcataacaacataagtgcaggaagtggccaagctaaagct
gaacaggtgcagtcgcccctgtctagttccaacttcccttgttccccggcactgccgtcc
cttccgcttgcccatggccactcccacacccatgcacactcccacggccaccatgtcatc
atcaacgggcagaacaacctgaaccggccgggaacccagcgcatttccatgggcactgct
agaggagccatcccaccaggggtcccggccctccctgttaagaacttgactggctctgga
ccagttcacccagcaattgcaggtatgacaggtattctgatgtgtgctgctggcctgcct
gtgtgtctgacccgggcccctaaacccatcctgcacccgccgcccataaacaagagtgac
atgaagcctgtgcccggggtcaatggcatccgccgcaagaccaagaagaagcacctcagg
aaagggaaaaacccagaggatgtggtgcggagatacacggagaaagtgaaggtagcccct
gatgaggactgcaccatctgcatggagaggctggtgatgtcatcgggctacgagggtgtc
ctgcagcacaagggcataaagccagaaatggtgggcaagcttggcaagtgtgggcacatt
taccatctgctgtgcctggtggccatgtacaacaatggcaacaaggatggcagtctgcag
tgccccacttgtaaggctatctatggggagaagaccggcacacagccccctgggaagatg
gactaccatgtcatcccccactgcctgcccggctacctggaggccaagaccatccgcatc
gtctatgacattcctgctggcatacaggccacagagcatcccaacccagggaagaagttc
agcgctagaggcttcccacggcactgctacctcccagacaatgatcagggcaggaaggtc
ctgaagctcctgatcatggcgtgggaccgccgcctcatcttcaccatcgacacgtccagc
accacgggcgagtcagacacggtggtgtggaatgagatccaccacaagacagagtttggc
tccaatctgacagggcacggctacccagaccccaactatctggacaacgtcctgacagag
ctgtcagcccagggggtcgtagaggacaacctgaaggactga
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