Salvelinus sp. IW2-2015 (Arctic char): 111957980
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Entry
111957980 CDS
T05762
Symbol
ung
Name
(RefSeq) uracil-DNA glycosylase isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111957980 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
111957980 (ung)
Enzymes [BR:
salp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
111957980 (ung)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111957980 (ung)
Prokaryotic type
111957980 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
111957980
NCBI-ProteinID:
XP_023834891
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Position
LG33:21965860..21972928
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AA seq
306 aa
AA seq
DB search
MLAMNVPYLRRSPKKCLTAPLTATRVSPTLHFAQYTKVGRVKKLKRSGNGTTESSSSPVC
PELLARIAKNKQAALEKLCASNTPDEFGESWRKSLVSEFGKPYFKNLMSFVDGERKLNTV
YPPPQHVFTWTQMCDIHDVKVVVLGQDPYHGSNQAHGLCFSVQRPIPPPPSLLNMYKELA
SDIEGFQHPGHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVVQWLSSNRE
GLVFMLWGAYAQKKGAAIDRKRHHVLPTVHPSPLSAHRGFFGCKHFSKTNELLEKSGKEP
IDWKAL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcaatgaatgtaccatatttgcgacgttctcccaaaaaatgtttaactgcacca
ttaacagccacacgtgtttcaccaaccttgcattttgctcaatataccaaggttggacgg
gtgaagaagctgaagcgatcaggcaacggaacgacggagtcatcctcttctccagtgtgt
ccagaactgctggcccgaatcgccaaaaacaagcaagcagcgttggagaaactgtgcgca
agtaacacaccggatgaatttggggagagttggcgaaagagtttggtctctgagtttgga
aagccttatttcaaaaacttgatgtctttcgttgatggagagaggaaactgaacactgtc
tacccaccccctcagcatgttttcacctggacacagatgtgtgacatccacgatgtcaag
gttgtagtcctcggtcaggacccatatcacggttcaaaccaagcccatggattatgcttc
agtgtgcagagacctatcccacctccacccagcttgttgaatatgtacaaagaattggcg
tctgatatagagggcttccagcaccctggacatggagatttaactggatgggctaaacaa
ggtgtcttgttgctcaatgctgtgctgaccgtccgagcgcaccaggccaactctcacaaa
gacaagggctgggaaaccttcactgacgctgtggtgcagtggctcagctccaaccgggag
ggcctcgtcttcatgctgtggggggcctatgctcagaagaagggagcagctattgatagg
aaacgtcaccatgttcttcccactgtacacccctcccctttatctgctcatcgagggttc
ttcggatgcaagcacttttccaagaccaatgagttgctggagaaatcagggaaggagccc
atagactggaaggcactttga
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